Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0666 ATGGCTGGAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCTAATTCTTCTTTTAAGTCATCCATTATCACAAAGAAAGATGGTTCTGACTCTACTGGCAGCAACTCCTTAAGAGTGCTTGCTTTTGTTGGAGCTGGTGTGTCAGGGTTTTTAGGTTTTGCAACAACAGCATTTGCTGATGAAGCTGAGCATGGCCTGGCTTGTCCAAGCTATCCATGGCCTCACAAGGGCATCCTTAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATCAAGAAGTCTGTGCTTCTTGTCATTCTATGTCTTTGATATCATACCGTGATTTGGTTGGTGTTGCTTATACTGAAGAAGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGCGAGATGTTTACACGCCCTGGTAAACTCAGTGATCGCTTTCCCCAGCCATATGCAAATGAAGCAGCAGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTTGTTACCAAAGCTCGCCACAATGGTCAGAACTATGTGTTTTCCCTTCTAACCGGTTATCGTGACCCTCCTGCTGGTGTTTCGATTAGAGAAGGACTGCACTATAATCCTTATTTTCCTGGTGGGGCTATTGCTATGCCTAAAATGCTTAATGATGGCGCTGTTGAATATGAAGATGGTACCCCTGCTACAGAATCTCAGATGGGTAAAGATATTGTATCATTCCTGACTTGGGCTGCGGAACCTGAGATGGAAGAGAGAAAACTGATGGGATTCAAATGGATATTTGTTCTATCACTGGCATTACTTCAAGCTGCCTATTACCGTCGCCTTCGGTGGTCCGTTCTAAAGTCTCGCAAGCTGGTTCTTGATGTTGTCAACTAG 924 0.4448 MAGGVIRQLFRRKLQSHSPNSSFKSSIITKKDGSDSTGSNSLRVLAFVGAGVSGFLGFATTAFADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQEVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLVTKARHNGQNYVFSLLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDIVSFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0666 307 MobiDBLite consensus disorder prediction 16 37 - -
Gso19g0666 307 PRINTS Cytochrome C1 signature 76 95 IPR002326 GO:0009055|GO:0020037
Gso19g0666 307 PRINTS Cytochrome C1 signature 96 115 IPR002326 GO:0009055|GO:0020037
Gso19g0666 307 PRINTS Cytochrome C1 signature 141 161 IPR002326 GO:0009055|GO:0020037
Gso19g0666 307 PRINTS Cytochrome C1 signature 174 198 IPR002326 GO:0009055|GO:0020037
Gso19g0666 307 PRINTS Cytochrome C1 signature 212 223 IPR002326 GO:0009055|GO:0020037
Gso19g0666 307 PRINTS Cytochrome C1 signature 223 242 IPR002326 GO:0009055|GO:0020037
Gso19g0666 307 PRINTS Cytochrome C1 signature 243 262 IPR002326 GO:0009055|GO:0020037
Gso19g0666 307 PRINTS Cytochrome C1 signature 262 277 IPR002326 GO:0009055|GO:0020037
Gso19g0666 307 Gene3D - 263 306 - -
Gso19g0666 307 Gene3D - 67 262 IPR036909 GO:0009055|GO:0020037
Gso19g0666 307 PANTHER CYTOCHROME C1 18 307 IPR002326 GO:0009055|GO:0020037
Gso19g0666 307 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 18 307 - -
Gso19g0666 307 SUPERFAMILY Cytochrome c 71 261 IPR036909 GO:0009055|GO:0020037
Gso19g0666 307 Pfam Cytochrome C1 family 78 294 IPR002326 GO:0009055|GO:0020037
Gso19g0666 307 ProSiteProfiles Cytochrome c family profile. 90 197 IPR009056 GO:0009055|GO:0020037
Gso19g0666 307 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 262 306 IPR021157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0666 Gso-Chr19 27462293 27470624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0666 1 307 Chloroplast and Mitochondria Gene Families AT3G27240 83.388 2.06e-177 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0666 K00413 - gmx:100803087 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0647 5 8768219 8781816 Gso19g0666 19 27462293 27470624 GST