Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0663 ATGGACGAGAGAAAAAGAATAGATCCAAGGAGCGGTTTCAACCGCGCTTCCAGAATCTTCCACAGCCTCAAGCCACCACTCCCCCTCCCTCCTCCCAACGCCACCTTCTCCGCCACAACCTACGCCCTCTCCCTCCGCCGCAACTCGCTATTTCCCGACTCCACCACCGCCCTCATCGATGCCACCACCGGCCACCGCCTCTCCCACTACGAGGTCATCAACCGCATCGAAACCCTAGCAAATAATTTCACCTCTATCCTCAAACTCTCCAAAGGCGACACTGCGCTCATTCTCTCCCCAAACCTCATCCAAGTTCCAATCCTCTGCTTCGCACTTCTTTCGCTTGGCGTGGTCGTCTCTCCCGCGAACCCTATCTCCACGCGCTCCGATCTCACGCGCCTCTTCCACCTCAGCAAACCTGCAATTGTCTTCACAGTAACTTCAGTCGTTGAGAAAACACAAGACTTTCATGTTAGAACCGTACTCCTCGACTCGCCCGAGTTCGACTCGCTCACGAAGACTCGGATTCAGATACATCCTCCGAGTCCACTCGTTTCCCCCGTGACTCAATCTGACGTGGCAGCGATTTTATACTCGTCGGGGACCACGGGGATGATGAAGGGTGTGGTAATGACGCACCGTAACCTAACGGCGTTAGCCGCGGGATACGACGCCGTTAGAGTAAACAGAAAGTATCCCGCGGTGTTCTTCTTTACGATGCCGTTTTTCCACGTGTACGGGTTCACGCTCAGTTTTAGGGCAATGGTGCTGTCGGAGACGGTGGTGATAATGGAGAGGTTCAGTTTGAGGGGGATGCTGAGCGCCGTGGAGAGGTTCGGAGTGACACACCTGGCGGTGGTGCCGCCGCTGATGGTAGCTTTGACGAAGGACAGCGTCACCAACGGGTACGATTTGAAGACGCTGGAAGGGGTTACGTGCGGTTCGTCTCCACTGGGAAAGGAAACCGCTGAGGCTTTCAAAGCAAAGTTCCCCAACGTCATGATCCTCCAGGGATACGGTTTAACAGAGTCAACTGCTGGGGTTGCCCGAACATCTCCAGAGGACGCTAATCGGGCAGGAACAACAGGTAGACTGGTATCAGGAGTGGAAGCCAAAATTGTGAATCCAAATACAGGAGAAGCCATGTTTCCCTGTGAACAAGGAGAACTTTGGATCAAATCACCTAGTATTATGAAAGGTTATGTTGGTGACCCTGAAGCAACTTCAGCAACTTTGGTGGATGGGTGGTTAAGGACTGGGGACCTCTGTTATTTTGATAACGAAGGGTTCTTGTATGTTGTAGATAGATTGAAAGAGTTGATCAAATACAAGGGGTACCAGGTTGCTCCGGCAGAGCTCGAACAATATCTCCTGTCTCACCCAGAAATAAATGATGCCGCGGTTATTCCATACCCTGATGAAGAAGCCGGCCAGGTGCCCATGGCGTTTGTGGTAAGACAACCCCAAAGTTCCCTGAGTGAAATAGAGATAATTGATTTTGTAGCCAAACAGGTTGCACCATACAAGAAAATAAGGCGTGTAGCATTTGTTGATTCAATACCGAAGAATGCCTTAGGAAAGATACTAAGGAAGGACTTAAATAAACTTGCTCTCTCTAGGCTATAA 1626 0.5105 MDERKRIDPRSGFNRASRIFHSLKPPLPLPPPNATFSATTYALSLRRNSLFPDSTTALIDATTGHRLSHYEVINRIETLANNFTSILKLSKGDTALILSPNLIQVPILCFALLSLGVVVSPANPISTRSDLTRLFHLSKPAIVFTVTSVVEKTQDFHVRTVLLDSPEFDSLTKTRIQIHPPSPLVSPVTQSDVAAILYSSGTTGMMKGVVMTHRNLTALAAGYDAVRVNRKYPAVFFFTMPFFHVYGFTLSFRAMVLSETVVIMERFSLRGMLSAVERFGVTHLAVVPPLMVALTKDSVTNGYDLKTLEGVTCGSSPLGKETAEAFKAKFPNVMILQGYGLTESTAGVARTSPEDANRAGTTGRLVSGVEAKIVNPNTGEAMFPCEQGELWIKSPSIMKGYVGDPEATSATLVDGWLRTGDLCYFDNEGFLYVVDRLKELIKYKGYQVAPAELEQYLLSHPEINDAAVIPYPDEEAGQVPMAFVVRQPQSSLSEIEIIDFVAKQVAPYKKIRRVAFVDSIPKNALGKILRKDLNKLALSRL* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0663 541 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 536 - -
Gso19g0663 541 SUPERFAMILY Acetyl-CoA synthetase-like 39 539 - -
Gso19g0663 541 Gene3D - 30 438 IPR042099 -
Gso19g0663 541 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 8 536 - -
Gso19g0663 541 CDD 4CL 48 533 - -
Gso19g0663 541 Pfam AMP-binding enzyme 54 443 IPR000873 -
Gso19g0663 541 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Gso19g0663 541 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Gso19g0663 541 Gene3D - 439 539 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0663 Gso-Chr19 27329515 27339299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0663 2 538 Monolignol Biosynthesis Gene Families AT5G63380 49.183 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0663 - - gmx:100801143 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0654 5 9253333 9271347 Gso19g0663 19 27329515 27339299 GST