Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0658 ATGATGAAGATTTTCTCCTCAATTCAACCACGCACCCCACCATTTTCGTTGTACAAGATTTTTCTCTCACACTACTCAAGGACTCAACTTTCTTTTCCTACAAAGGTCTTCTTTTGCCAGGCAAAATCTGATGGTGCTTTTTACTCAGGCACAGACGGATCATTGAATTTAGAAGTGGTGTCTCCCACTCTGTTAGTAGCAGAAAAGGAAGAAGCCAAGGCTGTGTTGACTTTGTTTTTAAAGAAACAAGGTTTGAGCAATGCTATTGCCACTAGAACCAGCAAGAAGTCAGATCATTTTATTGATCACCTTGTCTCAAGGCTTCACTCTAAACACAAATCTTGGTATCTTGCAGGGAGAGAGCTAACGACTCTAGAGATCAGGGACACACTTATCCCTTATCTTGAATCTCTTTTCGAAGAGCATGGAGACATCCTAGTGAATGTAGTGGAAAACTATCCAAATCCACCTGGTAAGGATAAATCAGCTGTGCCGATTCCTCCTTCTAATCCAGTGTCAGACTCTAAGAAGCTTAAAGCTGTGTCTCGAGTGAGTGAGACAGACCCAGATGGTGGCAATCTTCGCCCTCATATTGTCTATCTCATGGACCTTGGTATGGATATTGAGCAGATTAGGAGTATCACACGACGATTTCCATCTTTTGCCTACTATAGCTTGGAGGGTAAAATTAAGCCAGTGGTTGAGTTTTTTCTTGAACTTGGAGTGCCAAAAGAGAACATTCTTACTATCCTCACTAAAAGACCTCAATTATGTGGAATCAGTCTATCTGAAAATCTTAAACCCACCATGAAGTTCTTTGAATCTTTGGGTGTTGACAAAAACCAATGGCCAAAGGTGATCTATCGCTTCCCAGCACTGCTAACTTATAGCAGGCCGAAAGTGATGGAAAGCATAGATTTTCTCCTTGAATTAGGCCTCTCAGAAGAGAGTATAGGTAAGATTTTAACTCGCTGCCCCAACATTGTTAGTTACAGTGTAGAGGACAATCTCCGACCCACGGCTAAGTACTTCCATTCTTTGGGGGTTGAAGTTGGCGTTCTTCTCTTCAGATGCCCTCAAAATTTTGGTCTTAGCATTGAGAACAACCTAAAGCCTGCAACAGAATTTTTCTTGGAGCGGGGATACACTTTGGAAGAAATTGGGACCATGATTTCAAGATATGGAGCCTTGTATACTTTCAGCTTGACTGAAAATTTGATTCCAAAATGGGATTTCTTCTTGACCACAGGTTACCCAAAATCTGAGTTGGTTAAGTTCCCTCAATATTTTGGATACAATTTAGAGGAAAGGGTTAAACCTAGATTCACAATTATGAAAAAATATGGAGTGAAGTTACTGCTGAATCAGGTTCTTTCACTGTCAAGCAGCAACTTTGATGAAGCCTTGAAAAAGAAAATGAAGAAAATGCAAGTTAGTTAG 1440 0.4056 MMKIFSSIQPRTPPFSLYKIFLSHYSRTQLSFPTKVFFCQAKSDGAFYSGTDGSLNLEVVSPTLLVAEKEEAKAVLTLFLKKQGLSNAIATRTSKKSDHFIDHLVSRLHSKHKSWYLAGRELTTLEIRDTLIPYLESLFEEHGDILVNVVENYPNPPGKDKSAVPIPPSNPVSDSKKLKAVSRVSETDPDGGNLRPHIVYLMDLGMDIEQIRSITRRFPSFAYYSLEGKIKPVVEFFLELGVPKENILTILTKRPQLCGISLSENLKPTMKFFESLGVDKNQWPKVIYRFPALLTYSRPKVMESIDFLLELGLSEESIGKILTRCPNIVSYSVEDNLRPTAKYFHSLGVEVGVLLFRCPQNFGLSIENNLKPATEFFLERGYTLEEIGTMISRYGALYTFSLTENLIPKWDFFLTTGYPKSELVKFPQYFGYNLEERVKPRFTIMKKYGVKLLLNQVLSLSSSNFDEALKKKMKKMQVS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0658 479 Pfam mTERF 367 465 IPR003690 GO:0003690|GO:0006355
Gso19g0658 479 Pfam mTERF 198 379 IPR003690 GO:0003690|GO:0006355
Gso19g0658 479 SMART mt_12 284 314 IPR003690 GO:0003690|GO:0006355
Gso19g0658 479 SMART mt_12 175 207 IPR003690 GO:0003690|GO:0006355
Gso19g0658 479 SMART mt_12 420 451 IPR003690 GO:0003690|GO:0006355
Gso19g0658 479 SMART mt_12 319 350 IPR003690 GO:0003690|GO:0006355
Gso19g0658 479 SMART mt_12 388 419 IPR003690 GO:0003690|GO:0006355
Gso19g0658 479 SMART mt_12 212 243 IPR003690 GO:0003690|GO:0006355
Gso19g0658 479 SMART mt_12 352 383 IPR003690 GO:0003690|GO:0006355
Gso19g0658 479 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Gso19g0658 479 Gene3D Transcription termination factor 3, mitochondrial 255 475 IPR038538 -
Gso19g0658 479 PANTHER CGI-12 PROTEIN-RELATED 25 477 IPR003690 GO:0003690|GO:0006355
Gso19g0658 479 MobiDBLite consensus disorder prediction 158 189 - -
Gso19g0658 479 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 25 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0658 Gso-Chr19 27186600 27189850 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso19g0658 mTERF 6.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0658 K15032 K12177 gmx:100775277 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0657 5 9445708 9449214 Gso19g0658 19 27186600 27189850 GST