Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0655 ATGAGACATTTCTGTTACCTTTATCTTGTGGTTCTTTCATGGTTTTTGTTCATCCCCAACACTCATGAATTACAAGCAGCTCAGACTCAAGCCTTGTTCCAGTTAAGAGTTTATCTAGAGTACCCTTCTTCTCTTCAAATTTGGGAAAATTACAATTGGGACCTATGCAGTATTTCTCCCTCTGCAAATCTGAGCATTAAATGTGAGGATGATGAGGTAACTGAGCTTAAAATTATGGGAGAAAAGTCTGAGAAGCCGCCAATGTTCAATGGATTTGCAGATCCTAATCAGACACTATCCATGAATTTTTCCATTGATTCCTTTTTCACCACTCTGACAAGGTTGACCAGCTTAAGGGTTCTTAGCTTGGTGTCCTTGGGGATTTGGGGGCCACTTCCTGATAAGATTCACCGTTTCTCTTCTCTTCAAGTTTTGGACTTGAGCTCCAATTTCATATTTGGAGCCATCCCACAAAAATTATCCACAATGGTAAAGCTTCATGCACTGACCCTTGATGACAATTATTTTAACACCACTATGCCTGATTGGTTTGATTCCTTGTCTAATCTAAATATCTTGAGTGTGAAGAGCAATGGTTTAAAGGGTTCATTCCCCTCCTCACTATGCAAAATTAAGACACTTGAAGTGATTTCCTTGTCCCACAATGAGCTGTCTGGGGAATTACCTGATCTGGGTTCTCTCACTGGTCTACATGTTCTGGATTTAAGAGAAAACCATTTAGAATCTGAACTACCGTTGTTTCCTAAATCAGTGGTCACAGTTTTGCTTAGCAATAACTCATTCTCAGGAGATATACCTAAGCAGTTTGGTGAATTAGATCAGCTTCAACATCTAGATCTGTCTTCAAATCACCTCAGTAAGACACCGCCATCTACCTTGTTTTCTTCGCCCAAAATAAGTTATTTGAATCTGGCAAACAATGTGCTAAGTGGGGCCCTCCAAGACAAACTTAGCTGTGGGGGCAAACTTGGGTTTGTGGACATTTCTAGTAACAAGTTAAGTGGTGGACTTCCTTCTTGCTTGGCCAATACTACTGATGGTAGAGTTGTCAGATATGCTGGAAACTGTTTATCTCTGGATTCTCAGAACCAAAATAGTGGGTCTTATTGTAGAGAATCTAGCTCTGGATGGAAGAACTTGAAGAAATGGAAAGTAGCTGCAGCAATGGCCATCATTGTTGGACTTGTTCTTGTGGTTTTGGTGTCTGGAGTCTTCTTATGGAAAAAATATCATTCCAGAAAGAAAACTGGGCAGGAAGTGTTGCTAAAAATTGTTCACGATAACTCCACAACTGGGGTTCCATCTGAGATCCTTGCAAATGCTAGATTTATTTCTCAAACAGTGAAGCTAGGGACACAAACTACTTCAACCTGTCGACATTTTTCGATAGAGGAATTGAAGGAAGCCACAAAAAACTTTGACTTGTCAACTTATATTGGTCAAGGCTCCATAGGGAAGCTGTTCAAAGGTAAACTAGAGAATGGATCCTACGTGGCGATACGATCTTTGGCTCTGTCAAAGAAATGCTCTATTCAAAATCTTAGAGCTAAATTGGATTTACTCTCAAAGCTTCAACATCCAAATTTGGTTAGCCTTTTGGGCCATTGTATTGATGGTGGTGGACAAGATGATCCCAATTCCCACAAGCTTCATCTTGTATATGAGTATGTGCCAAATGGGAATTATCGTACACATCTCTCAGAATTTTCTGTAGATAAGGCACTTAAGTGGTCTGATAGATTGACAATTTTAATTGGAATTGCAAAGGCAGTGCATTTCTTACATACTGGTGTTATACCTGGCTGTTTTAGTAACCAACTAAAGACAAAGAATGTCTTACTTGATGAACACCGCATTCCAAAACTGAGTGACTATGGTATGTCCATCATCACAGAAGAAATTGAAAATTTTGAGGCAAAGGGTGAGAAACCAAAACCATGCCCACGGACCAAAGCGGACGATGATGTTTATAATTTTGGATTCATATTGTTTGAATCACTTGTTGGACCCATAGCATGCGACAAAGGTGAAACATTTTTTCTAAATGAAAAGGCATCCTTTGGCAGTCAAGATGGTCGAAGAAAGATTGTGGATCCTATAGTGTTGACCACTTGCTCTCAAGAGTCATTATCAATTGCAATCTCAATAACAACTAAATGCATATCTCCAGAATCTTCATTTCGTCCCTCTTTTGAGGATGTCCTATGGAACTTACAGTATGCAGCTCAAGTCCAAGCCACAACAGATGCTGACCACAAATCAGATTAA 2289 0.3967 MRHFCYLYLVVLSWFLFIPNTHELQAAQTQALFQLRVYLEYPSSLQIWENYNWDLCSISPSANLSIKCEDDEVTELKIMGEKSEKPPMFNGFADPNQTLSMNFSIDSFFTTLTRLTSLRVLSLVSLGIWGPLPDKIHRFSSLQVLDLSSNFIFGAIPQKLSTMVKLHALTLDDNYFNTTMPDWFDSLSNLNILSVKSNGLKGSFPSSLCKIKTLEVISLSHNELSGELPDLGSLTGLHVLDLRENHLESELPLFPKSVVTVLLSNNSFSGDIPKQFGELDQLQHLDLSSNHLSKTPPSTLFSSPKISYLNLANNVLSGALQDKLSCGGKLGFVDISSNKLSGGLPSCLANTTDGRVVRYAGNCLSLDSQNQNSGSYCRESSSGWKNLKKWKVAAAMAIIVGLVLVVLVSGVFLWKKYHSRKKTGQEVLLKIVHDNSTTGVPSEILANARFISQTVKLGTQTTSTCRHFSIEELKEATKNFDLSTYIGQGSIGKLFKGKLENGSYVAIRSLALSKKCSIQNLRAKLDLLSKLQHPNLVSLLGHCIDGGGQDDPNSHKLHLVYEYVPNGNYRTHLSEFSVDKALKWSDRLTILIGIAKAVHFLHTGVIPGCFSNQLKTKNVLLDEHRIPKLSDYGMSIITEEIENFEAKGEKPKPCPRTKADDDVYNFGFILFESLVGPIACDKGETFFLNEKASFGSQDGRRKIVDPIVLTTCSQESLSIAISITTKCISPESSFRPSFEDVLWNLQYAAQVQATTDADHKSD* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0655 762 Gene3D Ribonuclease Inhibitor 25 256 IPR032675 -
Gso19g0655 762 SMART LRR_typ_2 279 302 IPR003591 -
Gso19g0655 762 SMART LRR_typ_2 234 256 IPR003591 -
Gso19g0655 762 SMART LRR_typ_2 139 163 IPR003591 -
Gso19g0655 762 SUPERFAMILY L domain-like 112 365 - -
Gso19g0655 762 Pfam Protein tyrosine and serine/threonine kinase 482 741 IPR001245 GO:0004672|GO:0006468
Gso19g0655 762 ProSiteProfiles Leucine-rich repeat profile. 213 235 IPR001611 GO:0005515
Gso19g0655 762 Gene3D Transferase(Phosphotransferase) domain 1 564 762 - -
Gso19g0655 762 Gene3D Phosphorylase Kinase; domain 1 417 563 - -
Gso19g0655 762 ProSiteProfiles Leucine-rich repeat profile. 281 302 IPR001611 GO:0005515
Gso19g0655 762 SUPERFAMILY Protein kinase-like (PK-like) 460 745 IPR011009 -
Gso19g0655 762 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 2 762 - -
Gso19g0655 762 Gene3D Ribonuclease Inhibitor 257 387 IPR032675 -
Gso19g0655 762 PANTHER OS07G0166700 PROTEIN 2 762 IPR045272 GO:0004714|GO:0006468
Gso19g0655 762 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Gso19g0655 762 Pfam Leucine rich repeat 259 316 IPR001611 GO:0005515
Gso19g0655 762 ProSiteProfiles Protein kinase domain profile. 480 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0655 Gso-Chr19 27104302 27111047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0655 1 693 Miscellaneous Gene Families AT5G14210 56.046 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gso19g0655 PK_Tyr_Ser-Thr 1.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0655 - - gmx:100799183 1472.99