Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0643 ATGAGTAGCAATGATCAAACTTCTGGTACTAGTCTCTACATTAGGGCTTTAATTTGCAACGCTGCTTCTGGTGCCGCTGCTGGGGCAATAGCGGCTACATTTGTGAGCCCATTGGATGTGATCAAGACTAGGCTACAAGTTCATGGCCTTCCTCACGGGCAGAAAGGCAGTATCATTATAACAAGCTTGCAAAATATAGTAAGGAATGAAGGTTTTAGGGGAATGTACCGTGGCCTTTCACCAACAATAGTGGCATTACTTCCGAATTGGGCAGTTTACTTCACAAGTTATGAGCAACTAAAGGGTCTACTTCGTTCACGCGATGGTTGCAACGAACTCACAACTATTGGAAGTATTATAGCCGCTGCTGGTGCTGGTGCAGCAACAGCGATTTCTACAAATCCATTGTGGGTTGTTAAGACAAGACTTCAAACACAAGGAATGAGGCCTGATGTTGTTCCTTACAAGAGTGTTCTTTCTGCTTTGACAAGGATTACACATGAGGAGGGCATACGAGGCCTATATAGTGGCATTGTTCCATCATTGGCTGGTGTAAGTCATGTTGCAATTCAATTTCCAGCATATGAAAAGATCAAGTCATACATTGCAGAAAAAGACAACACAACTGTTGACAAGCTAACTCCTGGGAGTGTTGCCGTTGCATCATCAATTTCAAAAGTATTTGCCTCTGTAATGACTTATCCACATGAAGTAATTCGATCCCGGCTGCAAGAGCAAGGCCAAGCCAAAAATATTGGGGTTCAATATGCAGGGGTTATTGACTGTACTAAGAAGGTGTTTCAAAAGGAAGGCATTCCAGGCTTTTATCGTGGTTGCGCAACCAATCTATTTAGAACAACTCCATCTGCAGTTATTACATTCACTAGTTATGAGATGATACACAGGTTTTTGGAGCGAGTTGTACCTCAGGACAAAGGGTATCTGCATGGCCTTTCTAAAGCCAATGAACTTAACAAGCCCCAGCCAAAAGCTAGTGGCAGTGACACTGATAGGGGGCAACCACCATCTCAGTCTAACACGAAAGCTTCATCAATTCCTCATGGAAACAAAGAGCAGCTAACAAGACATTGA 1092 0.4322 MSSNDQTSGTSLYIRALICNAASGAAAGAIAATFVSPLDVIKTRLQVHGLPHGQKGSIIITSLQNIVRNEGFRGMYRGLSPTIVALLPNWAVYFTSYEQLKGLLRSRDGCNELTTIGSIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPDVVPYKSVLSALTRITHEEGIRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYIAEKDNTTVDKLTPGSVAVASSISKVFASVMTYPHEVIRSRLQEQGQAKNIGVQYAGVIDCTKKVFQKEGIPGFYRGCATNLFRTTPSAVITFTSYEMIHRFLERVVPQDKGYLHGLSKANELNKPQPKASGSDTDRGQPPSQSNTKASSIPHGNKEQLTRH* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0643 363 Pfam Mitochondrial carrier protein 215 305 IPR018108 -
Gso19g0643 363 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Gso19g0643 363 Pfam Mitochondrial carrier protein 20 105 IPR018108 -
Gso19g0643 363 Gene3D Mitochondrial carrier domain 16 304 IPR023395 -
Gso19g0643 363 MobiDBLite consensus disorder prediction 325 356 - -
Gso19g0643 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Gso19g0643 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Gso19g0643 363 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 312 IPR044712 GO:0006862|GO:0055085
Gso19g0643 363 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 12 312 - -
Gso19g0643 363 MobiDBLite consensus disorder prediction 320 363 - -
Gso19g0643 363 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Gso19g0643 363 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Gso19g0643 363 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Gso19g0643 363 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Gso19g0643 363 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Gso19g0643 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Gso19g0643 363 SUPERFAMILY Mitochondrial carrier 19 299 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0643 Gso-Chr19 26397995 26403805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0643 33 354 Chloroplast and Mitochondria Gene Families AT1G25380 64.832 6.40e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0643 K15115 - gmx:100797064 688.337