Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0603 ATGGCACGTTTCATCTACTACGACACCAAACCCCGATCCAAAAAACTCCTCCTTCTCCTCAACATATCCTTCATTTATCTCACCTTTCTCTTCCTCAAAACCTATCTCCACCCTTCTTCTAGTCCTAATATTGTTCATGCCTCCACAAAAATCTTCAACCATGCTAGAATGCTAAGTGACATCAGTGTTGATGGCTGCACTGATCTTCACAAGTACTCAGATTATGACTCCAAGTGCTTATATGTCAAATCCAATGTTCACTGCAGGTCAAAAGGGTACATAAACTATCTCCAAATCTTCTACTGCAGCTTTGGCCACTCCCCAATTTTGGGTCATTCACTGCTTGTAATGTGGCTTGTGGTATTGTTTTATCTTTTGGCTGATACAGCTTCAAACTACTTTTGCAATAACCTAGAAGGTCTCTCTGACATCTTAAGACTATCCCCAACCATAGCTGGGGTAACCTTGCTTTCTCTTGGAAATGGTGCCCCTGATTTTTTTGCAAGTGTTGTTTCTTTCACAAGATCCAATGATGGGGCAGTTGGCCTCAATAGCATTCTGGGGGGAGCATTTTTTGTCTCCAGTGCTGTTTTGGGGGTCATAAGTTTCCTTGTTAGAGCAAATGAAATTGCAATTGACAAGGCAAGTTTCATTAGAGATGTCATCTTTTTCCTCTTCTCTCTTTTCATCCTGCTTGTCATCATTTCCATTGGTAAAATTACCTTGCTGGGTTCAATTTGTTATGTTTCTATATACTTCCTTTATGTCTGTGCTGTCTCTGCCACATATTTCATCTATGGAGGGGACAGGACAGAATGTGAGCTTGTCTCATCTTCTGAGGACTTGACAGAATCTGGTATACCCTTGCTAGGCTGTGTTGATGATGAGAAATCAAATGTATCAAATAAAGAGGTTATTAAAGATAATAATGGGGACAAACAAAAGTGTTTTGGTTATGATTCATTTGACTTTACTTACTTGAGCAAGTTTCTACAAGTACTAGAGTTACCTCTTAGCTTGCCAAGAAGGCTTACTATACCAGTTGTTAGTGAGGAGGGTTGGTCAAAGCCATATGCTGTTATATCAGTTACTTTGGCCCCAGTGTTGTTTGCAACTCTTTGTAACACCCAAATGGAAAATGTGAGTTCAAAGAGTAGTCTTGTTTCATACTTGACAGCTGCTTTAATTGGGATTGTTTTGGGGAACATGGCATGTGTGACCACCAAGAGCACTAGTCCACCCAGAAAGTGCTTGTTTCCTTGGCTAGCTGGGGGCTTCTCTATGAGTGTAACATGGACCTACATCATTGCTGAGGAATTGGTTTCCCTCTTGGTTGCAATTGGGAGTGTCATAGGGGTTAGTCCTTCAATCCTTGGACTAACTGTCCTGGCTTGGGGTAATTCTCTAGGGGATTTGATAGCCAATGGTGCAATGGCCAAGAATGGTGGAGCTGATGGGGCCCAAATAGCTGTCTCTGGCTGTTATGCAGGTCCTATGTTTAACATTTTGATGGGCTTGGGCTTGCCTCTTGTTCTCTCAGCATGGTCTGAATACCCAGACTCTTATGTCATTCCCAAGGATCCTTCTCTTTATGCAACACTTTTGTTCTTGATGGGAGGGGTGCTTTGGGCCCTTGTGATATTGATAAAGAAGAAAATGAAGCTTGATAAGTCCTTGGGAGTTGGGCTCTTGACCATTTACCTCTGCTTTTTGTTTATAAGGATGGCCATAGCAATTGGTGTTATTAAATTCTAG 1755 0.4171 MARFIYYDTKPRSKKLLLLLNISFIYLTFLFLKTYLHPSSSPNIVHASTKIFNHARMLSDISVDGCTDLHKYSDYDSKCLYVKSNVHCRSKGYINYLQIFYCSFGHSPILGHSLLVMWLVVLFYLLADTASNYFCNNLEGLSDILRLSPTIAGVTLLSLGNGAPDFFASVVSFTRSNDGAVGLNSILGGAFFVSSAVLGVISFLVRANEIAIDKASFIRDVIFFLFSLFILLVIISIGKITLLGSICYVSIYFLYVCAVSATYFIYGGDRTECELVSSSEDLTESGIPLLGCVDDEKSNVSNKEVIKDNNGDKQKCFGYDSFDFTYLSKFLQVLELPLSLPRRLTIPVVSEEGWSKPYAVISVTLAPVLFATLCNTQMENVSSKSSLVSYLTAALIGIVLGNMACVTTKSTSPPRKCLFPWLAGGFSMSVTWTYIIAEELVSLLVAIGSVIGVSPSILGLTVLAWGNSLGDLIANGAMAKNGGADGAQIAVSGCYAGPMFNILMGLGLPLVLSAWSEYPDSYVIPKDPSLYATLLFLMGGVLWALVILIKKKMKLDKSLGVGLLTIYLCFLFIRMAIAIGVIKF* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0603 584 Gene3D - 358 577 IPR044880 -
Gso19g0603 584 Gene3D - 147 283 IPR044880 -
Gso19g0603 584 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 9 584 - -
Gso19g0603 584 PANTHER CATION/CALCIUM EXCHANGER 1 9 584 - -
Gso19g0603 584 Pfam Sodium/calcium exchanger protein 117 258 IPR004837 GO:0016021|GO:0055085
Gso19g0603 584 Pfam Sodium/calcium exchanger protein 422 574 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0603 Gso-Chr19 20807907 20809822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0603 64 582 Antiporters AT5G17860 52.471 1.83e-178 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0603 K13754 - gmx:100818583 1135.94