Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0591 ATGTTCCCTTTGGTTGTGTTGCTTTTTCTTGCGTGCAATTTTCATGTTGCACCTGTGAGCTCTTTGACCGTTGAAGGCTCTGTGCTTTTGGCACTGAAGAAGTCCATCATCACAGACCCTGAAGGGTCACTGAGTAACTGGAACTCTTCTGATGACACCCCTTGTTCATGGAATGGGATCACATGCAAGGACCAAAGTGTTGTCTCCATTAGTATCCCAAAGAGGAAGCTTCATGGGGTTCTTCCCTCAGAGCTAGGGTCACTTTCCCATCTCCGACATCTGAATTTGAGGAACAATAACCTCTTTGGGGACTTGCCTGTTGGGCTCTTTGAAGCTCAAGGACTTCAGAGTTTGGTGCTTTATGGAAATTCCTTATCTGGGTCTGTTCCAAACGAGATTGGGAAGCTCAGGTACCTTCAAGCTCTAGATTTGTCACAGAATTTCTATAATGGGTCTTTACCTGCTGCAATAGTCCAATGCAAGAGGCTCAGAACACTGGTTCTTAGTCATAACAATTTCACAGGTCCTCTGCCAGATGGGTTTGGTGGTGGCTTGTCTTCTCTGGAAAAACTTGACCTTTCTTTCAATGAATTCAATGGTTTAATTCCTAGTGACATGGGAAAGCTGTCAAGCCTGCAAGGCACTGTTGATTTGTCTCATAATCATTTCAGTGGTTCAATCCCAGCAAGTCTTGGTAATTTGCCTGAGAAGGTTTACATTGATCTCACTTACAACAATTTAAGTGGTCCAATACCTCAGACTGGTGCTTTGATGAATAGAGGACCAACTGCTTTTATTGGCAATTCTGGTCTTTGTGGCCCACCTTTGAAGAATCTGTGTGCCCCAGATACTCATGGTGCCAGTTCACCTTCCTCTTTTCCAGTTTTGCCTGATAATTACCCACCTCAGGATAGTGATGATGGTTTTGTGAAAAGTGGGAAAAGTAAAAGGCTAAGTAAGGGTGCTGTGGTTGGGATTGTTGTGGGGGATATAGTTGGAATTTGCCTTTTGGGTTTGCTGTTCTCTTACTGCTACTCAAGGGTTTGGGGTTTTACTCAGGATCAGGAGGAAAAGGGTTTTGACAAGGGAAGGAGATTGAGGAAGGAGTGCTTATGCTTCAGGAAGGATGAATCTGAGACCCTATCCGATCATGATGAACAATATGATCTTGTCCCATTAGATGCTCAAGTGGCCTTCGATTTGGATGAGCTTCTTAAGGCTTCAGCTTTTGTTCTTGGAAAGAGTGAAATAGGGATTGTCTACAAAGTTGTGCTTGAAGAAGGGCTCAACTTGGCTGTGAGAAGATTAGGGGAGGGAGGTTCTCAAAGGTTTAAAGAGTTCCAAACGGAAGTTGAAGCAATAGGAAAGTTAAGGCATCCGAATATTGTTACTCTGAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATCTATGATTATGTTCCCAATGGAAGCCTTGCTACAGCAATACATGGGAAAGCTGGACTTGCCACATTTACACCACTATCTTGGTCTGTTAGAGTGAAAATCATGAAGGGAGTTGCAAAAGGATTGGTCTACCTGCATGAATTTAGTCTAAAAAAATATGTCCATGGAGACCTGAAGCCTGGTAACATACTGTTAGGACATAGCCAGGAGCCCTGCATTTCCGATTTCGGTCTTGGACGCCTTGCTAACATTGCTGGAGGGTCTCCAACCTTGCAATCCAACAGAGTTGCTGCGGAGAAATCGCAAGAAAGACAGAGGAGTTTATCCACAGAAGTTACAACTAGTATTTTGGGAAATGGTTATCAAGCTCCAGAAACACTGAAAGTGGTGAAGCCATCACAGAAGTGGGATGTTTACTCATATGGGGTGATCCTGCTAGAATTGATTACAGGAAGATTGCCTATTGTCCAAGTTGGTAACTCAGAAATGGACCTTGTTCAATGGATTCAGTGCTGCATTGATGAGAAGAAGCCACTCTCAGATGTATTAGATCTTTATTTAGCTGAAGATGCAGATAAGGAAGAGGAGATCATTGCAGTTTTGAAGATTGCAATTGCTTGTGTCCATAGCAGCCCAGAAAAGAGACCCATAATGAGGCATGTGCTTGATGTTTTGGATAGATTATCCATACCCTCTGATTAG 2133 0.4332 MFPLVVLLFLACNFHVAPVSSLTVEGSVLLALKKSIITDPEGSLSNWNSSDDTPCSWNGITCKDQSVVSISIPKRKLHGVLPSELGSLSHLRHLNLRNNNLFGDLPVGLFEAQGLQSLVLYGNSLSGSVPNEIGKLRYLQALDLSQNFYNGSLPAAIVQCKRLRTLVLSHNNFTGPLPDGFGGGLSSLEKLDLSFNEFNGLIPSDMGKLSSLQGTVDLSHNHFSGSIPASLGNLPEKVYIDLTYNNLSGPIPQTGALMNRGPTAFIGNSGLCGPPLKNLCAPDTHGASSPSSFPVLPDNYPPQDSDDGFVKSGKSKRLSKGAVVGIVVGDIVGICLLGLLFSYCYSRVWGFTQDQEEKGFDKGRRLRKECLCFRKDESETLSDHDEQYDLVPLDAQVAFDLDELLKASAFVLGKSEIGIVYKVVLEEGLNLAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIVTLRAYYWSVDEKLLIYDYVPNGSLATAIHGKAGLATFTPLSWSVRVKIMKGVAKGLVYLHEFSLKKYVHGDLKPGNILLGHSQEPCISDFGLGRLANIAGGSPTLQSNRVAAEKSQERQRSLSTEVTTSILGNGYQAPETLKVVKPSQKWDVYSYGVILLELITGRLPIVQVGNSEMDLVQWIQCCIDEKKPLSDVLDLYLAEDADKEEEIIAVLKIAIACVHSSPEKRPIMRHVLDVLDRLSIPSD* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0591 710 Gene3D Ribonuclease Inhibitor 77 283 IPR032675 -
Gso19g0591 710 Gene3D Ribonuclease Inhibitor 14 76 IPR032675 -
Gso19g0591 710 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Gso19g0591 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Gso19g0591 710 SUPERFAMILY Protein kinase-like (PK-like) 411 702 IPR011009 -
Gso19g0591 710 ProSiteProfiles Protein kinase domain profile. 406 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0591 710 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 4 707 - -
Gso19g0591 710 Gene3D Transferase(Phosphotransferase) domain 1 482 708 - -
Gso19g0591 710 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 707 - -
Gso19g0591 710 SMART LRR_typ_2 185 209 IPR003591 -
Gso19g0591 710 SMART LRR_typ_2 88 112 IPR003591 -
Gso19g0591 710 Pfam Protein kinase domain 412 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0591 710 Pfam Leucine rich repeat 162 223 IPR001611 GO:0005515
Gso19g0591 710 Pfam Leucine rich repeat 89 147 IPR001611 GO:0005515
Gso19g0591 710 SMART serkin_6 411 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0591 710 Gene3D Phosphorylase Kinase; domain 1 375 481 - -
Gso19g0591 710 SUPERFAMILY L domain-like 27 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0591 Gso-Chr19 19232898 19235869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0591 4 710 Receptor kinase-like Gene Family AT2G01210 66.899 0.0 964
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso19g0591 Pkinase 1.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0591 - - gmx:100810225 1379