Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0589 ATGGAGCAAGGGAGCACAGACACTCGTGTGGATGCAAACCCAAGTCTTTCCAGTCACGAAGAAATACAATCTTTGGATTTCGATACTGAGTGTGAGACCAAAATGACCAACTCTGCTGGAAACGGGGCAGGAGGTTCTTCCTATGTTGAAGAAGGCGTGAGAAAAAAGCGCGGCAGAAAAAGTAAAAAGGAGATGGGAAAGATGTTAGATGCTACCGCCATGGAAGGTGGGGTTTCCGAGCAGAGACCCAGTAGAAAAAGAAAGAAATATGATGAAATGGCTGAATTTGAAATGTCTGGCACTGAGAAAAAATATGGTCTTAGGGGCTGTAAACAAGAGATGGAGCCAAAAGCCAACAGGAGAAAGGCCAAGTGTGATGAAGAGGGCCCCTTAACGTGCCATCAATGTAAGAGAAATGATAAAGGCAGGGTTGTGAGGTGCAAATGCTGTAACAAGAGAAGATTTTGCCTATTGTGTTTACAAGCTTGGTATCCTCATTTGAAAGAGGATGATATTGCTGAGAAATGTCCTGTGTGCCGTGGTAATTGCAATTGCAAAGCATGCTTGAGCTGTGATGAACTTATTAAGCAAATGAGGGAGTTTGCAAAAGCTGACAAAGAAGAGAAGGTTGAACTCTGTATGTATTTGCTGCAAGTACTTCTTCCATATTTACGGCAGTTGGATGAAGAACAGTTGATTGAGAATGAGACAGAAGCTAAGATACAAGGGCTCTCAGTCTCCAAGCTAAATTTAGCTAAGGCAGATTACTCTATGGAGGAGCGTGTGTACTGTGACAACTGCAAAACATCAATATTTGATTACCATAGAAGCTGCACAAAATGCTCTTTTGACCTTTGTCTCATCTGTTGCCGTGAGCTTCGTGGTGGGCAGCTTGTAGGTGGTGCAGATCCAATAGAGTTGGAGTTTGTTTGGCAAGGTCGTGGTTACTTGCATGCTGAAAAAAAAGATGAAGAGGTAAAACAAAATGCATCAGATGATGATTGTAAGCCTGAGGTTCGTGAATGGTCAAGATCTGGGTGGCTGGCACAAAGTGATGGTAGCATTCCTTGTCCAAAAGTCAATGATGAATGTAACCATGGTTTTCTTGAACTGAGAAGCATATTGGGTCAACATTTTGTCTCTGAGTTAGTGTGTAAAGCAAAAGAACTAGTGCAAGCATACAAGCTTCAAAATGTAGTTAAGACCGCAGACAACTTCTGTTCATGTTTGAAGCTTGATAGAAACACAGATGTTAGCTATAGTAATATGAGGAAGGCTGCTTCTCGAGAAGATTTGACTGACAACTATTTATACTGTCCTAAAGCTGTAGATCTTCAGTACAAGGATTTAAGGCATTTTCAGTGGCATTGGGAAAAGGGAGAGCCTGTCATTGTCAGCAATGTGCTTGAATGTACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTACGTCATGTAACTAATACCAAGCGTGGCCAACATTTGGCTGAGAAAACAATTGATTGCTTAGATTGGACTGAGGGGGAAATTAATATCCACCAATTTTTTACTGGCTATACAAATGGTCGTAAGGATTGGCTTGCTTGGCCACAGATATTGAAATTAAAAGATTGGCCTCCTTCTAATTTATTTGAGGAACAATTGCCTCGTCATTGTGCTGAGTTCATATCTTCCTTACCCTTCAAGGAATATACTGATCCTCACAAAGGTTCTCTTAACCTTGCTGTGAAGTTGCCTAATGGTTCTCTAAAGCCAGACCTGGGGCCAAAAACATATATTGCTTATGGATTTCCTCAGGAGCTTGGACGTGGTGATTCAGTGACTAAGCTCCATTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGAAACTGGATTCTGATCAACTTACTATCATTGAGAAGTTGAAGCAAAAGCACCTCGAGCAAGAGAAAAGGGAGCTACTTGGTGATGATCAGGATGGAGGAACTAATGTTGACATGCTTAATAATTCGTCTTCTACAATAAATGCTTTGGACAAGCAAAGTAGTGTTGAAGTCATGGAACAAGAAGGTGGATTATGTGATGGGAAAGAAGTTGACCAGTTTCATCAACCGTCTCGTAGTAATGAGGTTGCCATTGCTAATGAGGATGGTATTTCATATGGATCAGAGCTCATAGAGGTTGACAAAGTAAAAATAAATCAAGGTGATTTGTTGTTTGGGGGGGATGCTTCAGATGGTGCTCTCTGGGATATTTTTCGGAGACAGGATGTCCCTAAGTTGCAGGAATATCTGAAGAAGCATTTCAGAGAGTTTAGGCATGTCCATTGCTGTCCTTTAAAGCAGGTTATTCATCCCATCCATGACCAGACCTTCTATCTGACTATGGAGCATAAGAGGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACTTTTATTCAGAAGTTAGGAGATGCTGTTTTTATTCCAGTTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATCAAGGTTGCAATGGATTTTGTGTCTCCTGAAAATGTTGGGGAGTGCTTTCGTTTGACGGAGGAATTTCGCACACTTCCAATTAATCACAGGTCTACTGAGGACAAATTGGAGGTGAAGAAAATGACAATATATGCAATGGAAGATGTGATTGGAAAGTTGGAGAAAGCAAGGTCCGGGTTAACCAAGGGTCCAGAGTAA 2715 0.4158 MEQGSTDTRVDANPSLSSHEEIQSLDFDTECETKMTNSAGNGAGGSSYVEEGVRKKRGRKSKKEMGKMLDATAMEGGVSEQRPSRKRKKYDEMAEFEMSGTEKKYGLRGCKQEMEPKANRRKAKCDEEGPLTCHQCKRNDKGRVVRCKCCNKRRFCLLCLQAWYPHLKEDDIAEKCPVCRGNCNCKACLSCDELIKQMREFAKADKEEKVELCMYLLQVLLPYLRQLDEEQLIENETEAKIQGLSVSKLNLAKADYSMEERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRGGQLVGGADPIELEFVWQGRGYLHAEKKDEEVKQNASDDDCKPEVREWSRSGWLAQSDGSIPCPKVNDECNHGFLELRSILGQHFVSELVCKAKELVQAYKLQNVVKTADNFCSCLKLDRNTDVSYSNMRKAASREDLTDNYLYCPKAVDLQYKDLRHFQWHWEKGEPVIVSNVLECTSGLSWEPLVMWRALRHVTNTKRGQHLAEKTIDCLDWTEGEINIHQFFTGYTNGRKDWLAWPQILKLKDWPPSNLFEEQLPRHCAEFISSLPFKEYTDPHKGSLNLAVKLPNGSLKPDLGPKTYIAYGFPQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLDSDQLTIIEKLKQKHLEQEKRELLGDDQDGGTNVDMLNNSSSTINALDKQSSVEVMEQEGGLCDGKEVDQFHQPSRSNEVAIANEDGISYGSELIEVDKVKINQGDLLFGGDASDGALWDIFRRQDVPKLQEYLKKHFREFRHVHCCPLKQVIHPIHDQTFYLTMEHKRKLKEEYGIEPWTFIQKLGDAVFIPVGCPHQVRNLKSCIKVAMDFVSPENVGECFRLTEEFRTLPINHRSTEDKLEVKKMTIYAMEDVIGKLEKARSGLTKGPE* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0589 904 MobiDBLite consensus disorder prediction 1 89 - -
Gso19g0589 904 SMART cupin_9 551 862 IPR003347 -
Gso19g0589 904 Pfam JmjC domain, hydroxylase 749 845 IPR003347 -
Gso19g0589 904 PANTHER - 42 889 - -
Gso19g0589 904 ProSiteProfiles JmjC domain profile. 570 862 IPR003347 -
Gso19g0589 904 SUPERFAMILY Clavaminate synthase-like 448 884 - -
Gso19g0589 904 MobiDBLite consensus disorder prediction 29 44 - -
Gso19g0589 904 MobiDBLite consensus disorder prediction 1 22 - -
Gso19g0589 904 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 42 889 IPR045109 GO:0032454|GO:0033169
Gso19g0589 904 MobiDBLite consensus disorder prediction 50 69 - -
Gso19g0589 904 ProSiteProfiles Zinc finger RING-type profile. 133 180 IPR001841 -
Gso19g0589 904 Gene3D Cupin 436 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0589 Gso-Chr19 19033297 19048823 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gso19g0589 JmjC 3.2e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0589 K15601 - gmx:100797799 1753.8