Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0583 ATGGATCATTACAAGGTTCTCGGCCTGCACCGAACCGCGACCAAGGAAGAGATCAAAGCGGCGTTCAAGAAGCTAGCGTTCCAGTTCCACCCGGACAAGCATTCGCAATCGCCGAAGGCCGTTCGGGAAAATGCCACACTTCGATTCAAGCAGGTCTCCGAGGCCTACGAGGTTCTGATGGACGATCGCAAGCGCGCCGATTACAATTTCCGGCGGAGCTCCGGCGCCGGCACCGGAAACAACTACTATTCTCAGTATAGCTACGGATACGGTAGGAGTGGGAACAGTTATTATGAGTATAAACCTAGGTCTGGTGGCGGCGGCGGCTTCGCGTCCAAGTTCGAACTCGCGTTTCGGATTTTGACGGCGCGGTCATCGCTTCTCAATCTCGGCTTCGCAGCAGCTATATTAGGTGGGATAGTTGTCATTGATTCAGGTGGAGAATCCTTATGGAGAATGCAAAATTCTGGGAAATCTTTTGAAGAAGCTCTGAAGTCCATTGAGAAGGCCAAACCGTATAAAGAAGATAACATCGAGGAAGATCCTTGA 549 0.5118 MDHYKVLGLHRTATKEEIKAAFKKLAFQFHPDKHSQSPKAVRENATLRFKQVSEAYEVLMDDRKRADYNFRRSSGAGTGNNYYSQYSYGYGRSGNSYYEYKPRSGGGGGFASKFELAFRILTARSSLLNLGFAAAILGGIVVIDSGGESLWRMQNSGKSFEEALKSIEKAKPYKEDNIEEDP* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0583 182 SMART dnaj_3 1 64 IPR001623 -
Gso19g0583 182 CDD DnaJ 2 61 IPR001623 -
Gso19g0583 182 Pfam DnaJ domain 2 69 IPR001623 -
Gso19g0583 182 Gene3D DnaJ domain 1 91 IPR036869 -
Gso19g0583 182 PRINTS DnaJ domain signature 4 22 IPR001623 -
Gso19g0583 182 PRINTS DnaJ domain signature 22 37 IPR001623 -
Gso19g0583 182 PRINTS DnaJ domain signature 44 64 IPR001623 -
Gso19g0583 182 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Gso19g0583 182 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Gso19g0583 182 SUPERFAMILY Chaperone J-domain 1 97 IPR036869 -
Gso19g0583 182 PANTHER CO-CHAPERONE PROTEIN DJLA 1 164 - -
Gso19g0583 182 PANTHER CHAPERONE PROTEIN DNAJ 72 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0583 Gso-Chr19 17965537 17969932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0583 3 73 C2H2 Transcription Factor Family AT1G74250 39.437 1.19e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0583 - - gmx:100782769 340.117