Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0577 ATGGATTGCAGAATAGAGAGTGCCGAAACTCACAGGAATAAGTGTGCAGCATGCTTCCGACAGTTCAACAAACTGGAGCATCTTGTGGAGCACATGAGGATCTCATACCATTCGGTTCATGAACCAACCTGTGGCATTTGCAGGAAACACTGCAGGTCTTTTGAGTCTCTCAGGGAACATCTTATAGGTCCATTGCCAAAACAGGAATGCAGAGATATATTTTCCTATAGAGGGTGCAAGTTTTGTTTGAAAGTCTTTGAAAGCCCTAACTCTCGCAGGATCCACCAAGAAAAATGCCAACTCTCTGGAACAAATGCTGGAATAATTGGTCGCTTTTCAAACTTGGGACTTCGTGATAATTTGGCTATTGGTGGTGGAGCAAGAGGACCACAAGTAGTTGCTCTAGCATGTAAAATGGTTGGAGGCGGCAGTGATGGCTCACTTGATCTCTGTGCAAGAGTTTGCTTAATCGATGAACATGAGAACATAATATTCCATTCTTATGTGAAGCCACCAATTCCTGTCGCAAACTACAGGTATGAGACAACAGGCATCACACCAGAATATCTTAGGGATGCAATGCCAATGAGACATGTTCAGAGGAGGATTCATGACTTCCTTTGCAATGGTGAACCTATGTGGACAATTCGAGCAAGAGGTGGAAGAGCCAGGATTCTTGTGGGTCATGGTTTGGATCATGACCTTGAAAGTTTGCAAATAGAATATCGAGCTGAAAAAATAAGGGACACTGCAAAATACCCTCCACTGATGAAAACAAGCAAGCTGAGCAACTCACTCAAGTACTTAACACAGGCATATCTTGGGTATGACATTCAAACTGGGATTCAGGATCCTTATGAGGATTGTATTGCAACGATGAGGCTCTACATGAGAATGAGATCTCAAGCACATAGAGTACAGGAATACCCTTTGGCGTCTGACCCTCAGAACAGGAATAATTTTGCTTCATGGAGGCAAAGTGAGATTGAAAGAATGAGTCCTGAACAAATGCTAGAAATTTCAAGGTCTGACTACTACTGCTGGTGCTTGGATTCCTTGTATTGA 1065 0.43 MDCRIESAETHRNKCAACFRQFNKLEHLVEHMRISYHSVHEPTCGICRKHCRSFESLREHLIGPLPKQECRDIFSYRGCKFCLKVFESPNSRRIHQEKCQLSGTNAGIIGRFSNLGLRDNLAIGGGARGPQVVALACKMVGGGSDGSLDLCARVCLIDEHENIIFHSYVKPPIPVANYRYETTGITPEYLRDAMPMRHVQRRIHDFLCNGEPMWTIRARGGRARILVGHGLDHDLESLQIEYRAEKIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQTGIQDPYEDCIATMRLYMRMRSQAHRVQEYPLASDPQNRNNFASWRQSEIERMSPEQMLEISRSDYYCWCLDSLY* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0577 354 SMART exoiiiendus 131 305 IPR013520 -
Gso19g0577 354 ProSiteProfiles Zinc finger C2H2 type domain profile. 13 42 IPR013087 -
Gso19g0577 354 PANTHER OS02G0709000 PROTEIN 6 352 - -
Gso19g0577 354 SUPERFAMILY Ribonuclease H-like 145 300 IPR012337 -
Gso19g0577 354 ProSitePatterns Zinc finger C2H2 type domain signature. 15 37 IPR013087 -
Gso19g0577 354 Gene3D - 129 316 IPR036397 GO:0003676
Gso19g0577 354 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 6 352 - -
Gso19g0577 354 CDD REX4_like 133 296 IPR037431 GO:0006364|GO:0008408
Gso19g0577 354 Pfam Exonuclease 151 295 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0577 Gso-Chr19 16612327 16614757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0577 1 353 C2H2 Transcription Factor Family AT3G27970 74.438 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0577 - - gmx:100813973 744.577