Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0573 ATGTCCATAACACCTTTCACAGTGAAGGTTCTTGAGCAGTGCAAAATTACTCTCCCTCCCAACGAAACTACAACTACCTCTTTCCTCCCCCTAACCTTCTTTGACATTCCTTGGCTTTTCTTCTCTCCAAGCCAACCTTTATTTTTCTATGAATTCCCTCATCCAACCTCTCATTTCACAGCTACAATAGTCCCAAAACTAAAGCAATCTCTCTCACACACACTTCAACACTACTACCATTTTGTTGGTACATTTTTTCCCTCTTCTGATCTCACAAAACCCCCTCTCATTTGCATTGATGACATGTCAGTCGCGTTGACAATAGCTGAGTCAAATGGAGACTTTTTTCACTTATGTAGCAATTACCCTCGTGATCTCAAAGATTTCCACTTACTTGTGCCCAAATTGGCATCAAGCTTTTCACTTGAAGGCAAAGAAGAGTTAATTCTTGTGCTAGCTATTCAAATAACACTATTCCCAAATGTTGGTCTTTGCATTGGCCATGCTTTTCACCATGTTGTTGCTGATGGGAGGACCTTTCACAATTTCTTCAACACATGGGCCTCATATTGCTGCAGCTTTGGATCAGCTTCTTCAGCTTTTCCACTAAAGTCACTGCCATTGTATGATCGAAGTGTGATTATTGATGTAAAAGGCCTTGAAGAGGTTTTCTTGAAAGAATGGAGAAAAAGAAGACTAGTCCACGACATTGCCATTGGTAGAGAACCTAACTTAGAAGATGTCTCAGGTATGGTTAGAGCCACTTTCTTAATGAGTGCCACTGAAATGGAGAAGATTAAGTGCTTCATTATTAATTTTTGCAAAGAAAAGAATCAGACTCAGCCAGTTCATTTATCTCCTTATGTGTTGACTTGTGCATTTGTATGGGTTTGTTTGCTCAAAAACCAACAATGCTTGAATGAGAGAGTGAAGCACGAAGACCTCACATACTTTGGATTCATTGCTGGTGGCATAACTAGATTGGACTATCTAGGGCCAAAGACATATTCAGGTAATTGTGTTGGCTTTGGTAGGGCATCAGTGAAAATAAAAGAGTTACTTGGACAAGATGGGATTGTTGTTGCGGCTAGAGCAATTGGAAGCACCATTAAGAAGCTTGATTCATCACTTTTTGATGGGGCTGAGAAATGGATTTTGGACTGGGAGGTATTTCATGGGTCAGAGCAACATCTGCATGCTAAGTGGTCTCCAAAACTGAAGCTTTATGAATTGGATTTTGGGTGGGGGAGGCCCAAGAAAATAGAAGAGATGTCAATTGGTTATACAAGAGCTGTTTCACTTATTCAGAGTAGAGATGTTGAGTGTGGAATTGAGATAGGCTTGGCTTTACCTAAGAGTAAGATGGACACTTTCTTCATTTTGTTCACTAAAGGACTTAGTGTTCTTCCATGTGATCCTTTGATAAATTTTTCATGA 1437 0.3994 MSITPFTVKVLEQCKITLPPNETTTTSFLPLTFFDIPWLFFSPSQPLFFYEFPHPTSHFTATIVPKLKQSLSHTLQHYYHFVGTFFPSSDLTKPPLICIDDMSVALTIAESNGDFFHLCSNYPRDLKDFHLLVPKLASSFSLEGKEELILVLAIQITLFPNVGLCIGHAFHHVVADGRTFHNFFNTWASYCCSFGSASSAFPLKSLPLYDRSVIIDVKGLEEVFLKEWRKRRLVHDIAIGREPNLEDVSGMVRATFLMSATEMEKIKCFIINFCKEKNQTQPVHLSPYVLTCAFVWVCLLKNQQCLNERVKHEDLTYFGFIAGGITRLDYLGPKTYSGNCVGFGRASVKIKELLGQDGIVVAARAIGSTIKKLDSSLFDGAEKWILDWEVFHGSEQHLHAKWSPKLKLYELDFGWGRPKKIEEMSIGYTRAVSLIQSRDVECGIEIGLALPKSKMDTFFILFTKGLSVLPCDPLINFS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0573 478 Gene3D - 5 240 IPR023213 -
Gso19g0573 478 Gene3D - 249 469 IPR023213 -
Gso19g0573 478 PANTHER - 1 468 - -
Gso19g0573 478 PANTHER MALONYL-COENZYME A:ANTHOCYANIN 3-O-GLUCOSIDE-6''-O-MALONYLTRANSFERASE-LIKE 1 468 - -
Gso19g0573 478 Pfam Transferase family 17 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0573 Gso-Chr19 16130731 16132182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0573 40 458 Monolignol Biosynthesis Gene Families AT5G48930 21.053 2.35e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0573 - - gmx:100817166 970.304