Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0570 ATGCTGAATTTTCTTAATTTTTCTCTTCTATTGACGCTGTTGTTTCTTCTGTGGAAGCCTGCGATAAGCAAAAACGGGTGCACGGATAAGTGTGGACGCGTTCGCATTCAATTTCCATTCTACCTCAGAAATAATAGCAAATTGAATCACACCACCACCGCCTATTCTTCTGGGTTCGATCTGCTATGTACGGATGCAGATGAGACTGTGCTGGAGCTGCCTTCTGTTCCAATAAAACTGTTTGTCAAAAGCATAGATTACAAGTTGCAGCAAATCCAAATCTACGACCCTCAAAATTGCCTTCCCAGGGAACTCATAAAACTCGGCAATTCCTCTGTTGCTCCATTTAAATTCCAATCATTTGGTGGGAATAATGTTTCCTTCTTCCGCTGCAACTCAATGTCATCATCATGCCCAATTTTGCAACTTGGATATGAAGGTGACTTTATTGATCCTGAAATAATATCTTGCACCAAGGTGAGTGATGTTTTCTCCGTCCAGTGGCAAGTGAATAATTACTTGGGGAACGCGGTGGTTATGGAATGGTCCAAGCCTGACTGCAGTACCTGTGAAGCACAAGGGCATAAATGTAAATACAAGAATGGTACTCAAGGTGAAACTGAATGTTTCATTTGCCCAACAAACAGGATTTCAACATCAAGTGTTGTTCTTATTGCTGCAGGGGGAATAGTTGGAATGATTCTTTTGCTGGTGGTGGTCAAGGCGTTGTTGCATTTGTATGACCATTATATGACGAAAGGAGAAGACCGGGCTCGAATGGAGAAATTCTTGGAGGATTATAGGGCAATGAAGCCTACTAGATTCACTTATGCTGATATTAAGAGAATCACAAATGGGTTTAGGGAAAGTTTAGGGGAAGGAGCTCATGGAGCAGTCTTCAAAGGAATGCTCTCCCGAGAAATTCTCGTTGCCGTGAAGATACTCAATGACACAGTGGGAGATGGAAAGGATTTCATAAACGAAGTGGGAACCATGGGCAAAATTCATCATGTTAACGTTGTTCGCTTGCTTGGATTCTGTGCAGATGGATTCCACCGCGCTCTCGTCTATGATTTCTTCCCTAACGGATCACTGCAGAGATTCTTGGCTCCACCGGACAACAAGGATGTTTTCCTTGGTTGGGAGAAGTTGCAACAAATTGCTCTTGGTGTTGCCAAAGGGGTTGAGTATCTCCACCTTGGCTGTGATCAAAGAATACTTCACTTTGACATCAATCCTCACAATATTTTAATAGATGACCATTTTGTTCCAAAAATCACTGATTTTGGACTTGCCAAGTTGTGTCCCAAAAATCAAAGTACAGTTTCTATAACTGCTGCTAGGGGAACCTTAGGCTACATTGCTCCTGAAGTTTTCTCAAGAAACTTTGGTAATGTTTCTTATAAGTCTGACATTTATAGTTATGGAATGTTGCTCTTAGAGATGGTGGGAGGAAGAAAGAATACAAATATGTCAGCAGAGGAAAGTTTCCAAGTTTTGTACCCTGAATGGATCCATAATTTGCTCAAAAGCAGAGACGTGCAAGTTACTATTGAGGATGAGGGAGATGTTAGAATTGCCAAGAAACTTGCCATTGTAGGACTTTGGTGCATTGAGTGGAACCCAATAGACCGTCCATCCATGAAAACTGTGATACAAATGCTTGAAGGAGATGGAGACAAGTTAATTGCACCACCTACTCCTTTTGACAAGACCAGCTCTTCTAGAACAAGTGTAGTTGCTCCAACAAGACGCCAGAATTTTGAGTTGGAAATTATTAATGAAATAGAAGAATAA 1797 0.414 MLNFLNFSLLLTLLFLLWKPAISKNGCTDKCGRVRIQFPFYLRNNSKLNHTTTAYSSGFDLLCTDADETVLELPSVPIKLFVKSIDYKLQQIQIYDPQNCLPRELIKLGNSSVAPFKFQSFGGNNVSFFRCNSMSSSCPILQLGYEGDFIDPEIISCTKVSDVFSVQWQVNNYLGNAVVMEWSKPDCSTCEAQGHKCKYKNGTQGETECFICPTNRISTSSVVLIAAGGIVGMILLLVVVKALLHLYDHYMTKGEDRARMEKFLEDYRAMKPTRFTYADIKRITNGFRESLGEGAHGAVFKGMLSREILVAVKILNDTVGDGKDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQRFLAPPDNKDVFLGWEKLQQIALGVAKGVEYLHLGCDQRILHFDINPHNILIDDHFVPKITDFGLAKLCPKNQSTVSITAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNMSAEESFQVLYPEWIHNLLKSRDVQVTIEDEGDVRIAKKLAIVGLWCIEWNPIDRPSMKTVIQMLEGDGDKLIAPPTPFDKTSSSRTSVVAPTRRQNFELEIINEIEE* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0570 598 Pfam Protein kinase domain 289 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0570 598 Pfam Wall-associated receptor kinase galacturonan-binding 27 96 IPR025287 GO:0030247
Gso19g0570 598 SUPERFAMILY Protein kinase-like (PK-like) 266 556 IPR011009 -
Gso19g0570 598 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 52 597 - -
Gso19g0570 598 PANTHER RUST RESISTANCE KINASE LR10-RELATED 52 597 IPR045874 GO:0004672
Gso19g0570 598 ProSitePatterns Protein kinases ATP-binding region signature. 291 313 IPR017441 GO:0005524
Gso19g0570 598 Gene3D Phosphorylase Kinase; domain 1 259 359 - -
Gso19g0570 598 ProSiteProfiles Protein kinase domain profile. 285 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0570 598 Gene3D Transferase(Phosphotransferase) domain 1 360 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0570 Gso-Chr19 16014490 16016747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0570 186 568 Receptor kinase-like Gene Family AT1G66910 40.842 4.43e-102 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso19g0570 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0570 - - gmx:100819302 1160.21