Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0568 ATGAAGACGCCAAAACGCCAATCGTCGCCGGCAAACGCTGCTCGACCAGTGGAGTCTGATTCCGGCGAGATCGTCACGAGGTTCAAGAACGGTGGCCGGAGAAGGATCAAAATCAAGCGAATGAAGTACACTTGCCAGACGAAGATCCGCGTCAGGAATGACGCCGGCGCTGGCGGCGTGTCTCAACCGCCGGCGGTGGATTCTGAAGGAGAGAAGAGAGAGATTGACGAGCACGTGGAGATATCGCTGTCGCTGGCTTCCTCGTCGTCGGAAGAGGAAGAGCGATTGTCGTCGAAGCAAAGCGACGGCGTTTTGTCGTACGGTTCGGCGTCGGTGATAGGGAGCAGGACGGAGATGGAGGACGCGGTGAGCTCGGAGATAGGGTTTGCAGCGAAGTGCGACTTCTTTGCGGTGTACGACGGCCACGGCGGAGCTCAGGTGGCGGAGGCGTGCAAGGAGAGGCTGCACCGGCTGGTGGCGGAGGAAGTGGTGGGGAGTAGTGAGAGTCACGTGGAATGGGACTGGCGGGGAGTGATGGAAGGGTGTTTTCGGAAAATGGACAGCGAGGTCGCCGGTAACGCGGCCGTCAGGATGGTGGGTTCCACAGCGGTTGTCGCCGTCGTGGCGCTGGAGGAGGTTATCGTTGCTAATTGCGGTGATTCTAGGGCCGTGTTGGGAAGAGGAGGTGAGGCCGTGGACTTGTCTAGTGATCATAAGCCCCACAGGCCCGATGAGTTGATGAGAATCGAAGAGGCTGGTGGAAGGGTCATTAACTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAGGAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGACCCAGCGAAGCAGCAAGGATGAATTTCTCATACTAGCAAGTGATGGATTGTGGGATGTGATGTCAAGTGAAGTTGCGTGCCAAGTTGTAAGGAAATGCTTCCAGGGGCAGATTAGGAGAGTGTGCGATGGAGTTGGGAATCATCAAAACCGTGCTACCGATGCTGCAGACCTCTTGGCTGAGATAGCATTGGCAAAGGGAAGTAGAGATAACACCAGTGTCATTGTAGTTGAGCTAAGAGGAACAGTAACAACTGATTGA 1134 0.5503 MKTPKRQSSPANAARPVESDSGEIVTRFKNGGRRRIKIKRMKYTCQTKIRVRNDAGAGGVSQPPAVDSEGEKREIDEHVEISLSLASSSSEEEERLSSKQSDGVLSYGSASVIGSRTEMEDAVSSEIGFAAKCDFFAVYDGHGGAQVAEACKERLHRLVAEEVVGSSESHVEWDWRGVMEGCFRKMDSEVAGNAAVRMVGSTAVVAVVALEEVIVANCGDSRAVLGRGGEAVDLSSDHKPHRPDELMRIEEAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTQRSSKDEFLILASDGLWDVMSSEVACQVVRKCFQGQIRRVCDGVGNHQNRATDAADLLAEIALAKGSRDNTSVIVVELRGTVTTD* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0568 377 MobiDBLite consensus disorder prediction 52 73 - -
Gso19g0568 377 CDD PP2Cc 106 370 IPR001932 -
Gso19g0568 377 MobiDBLite consensus disorder prediction 1 15 - -
Gso19g0568 377 SUPERFAMILY PP2C-like 102 371 IPR036457 -
Gso19g0568 377 ProSiteProfiles PPM-type phosphatase domain profile. 106 370 IPR001932 -
Gso19g0568 377 MobiDBLite consensus disorder prediction 1 22 - -
Gso19g0568 377 SMART PP2C_4 96 368 IPR001932 -
Gso19g0568 377 ProSitePatterns PPM-type phosphatase domain signature. 135 143 IPR000222 GO:0043169
Gso19g0568 377 PANTHER PROTEIN PHOSPHATASE 2C 51-RELATED 77 375 - -
Gso19g0568 377 Pfam Protein phosphatase 2C 108 363 IPR001932 -
Gso19g0568 377 Gene3D - 99 374 IPR036457 -
Gso19g0568 377 PANTHER ALPHABET, ISOFORM E-RELATED 77 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0568 Gso-Chr19 15787440 15790888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0568 99 371 PP2C-type Phosphatase Gene Family AT1G07430 47.853 1.40e-86 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0568 K14497 - gmx:100818568 699.893