Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0534 ATGTGGTATCAAGAGCATCTTCATCTAGAGGCAACTTATGAAGTGTTACCTAGGCTTAATGAAATAAAATTTGGCAGTGGAGTAATTGGTGAACTTTTGTTTCTGGACTTGCCACGTGAAATAAGACTTGAAGAGAGTGTATATGAGCCGCTTCATGTTGTTCGTGAAGGTCAACTTCACATCATATTCACTCAAAACTTGAAGATCTTATCATGGGAGTTCTATGCTAGATGCCATGAAGAACTTCTTCCTCAAAGGTTGGTTGCACCACAGGTCTACTTAGTGCTTACATTATTAAAAAGTTGTACATTGGCAGGTACCTTCTTGACATTTTTCCATTTCTATTGTCTGTTCAGCAATAAATGTGATGATATTCCACTGTTTTGTTTTATATATGCATTTTATTCATTATGA 414 0.3599 MWYQEHLHLEATYEVLPRLNEIKFGSGVIGELLFLDLPREIRLEESVYEPLHVVREGQLHIIFTQNLKILSWEFYARCHEELLPQRLVAPQVYLVLTLLKSCTLAGTFLTFFHFYCLFSNKCDDIPLFCFIYAFYSL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0534 137 Pfam LIM-domain binding protein 9 92 IPR029005 -
Gso19g0534 137 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 9 102 - -
Gso19g0534 137 PANTHER LIM DOMAIN-BINDING PROTEIN 9 102 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0534 Gso-Chr19 12816010 12826470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0534 9 92 C2H2 Transcription Factor Family AT1G43850 56.701 8.17e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0534 - - gsj:114398278 287.345