Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0482 ATGGTAGGACCACCATATGTGGAGAACATGGAAAAGATTTTGAGGACTCTTTTGGCAAAAGAAAAGGTGGACAACGAACTTGAGTTTAAGGAACTTGCAACTATGACAGAAGGATATACTGGAAGTGATCTAAAGAACTTGTGCACAATTGCTGCTTATCGACCTGTTAGAGAGCTAATTCAGCAAGAGAGGCTAAAGAGTCTGGTGTGTAGAAGCAAGTTTCATGATGATCAATCAAGTTGA 243 0.3992 MVGPPYVENMEKILRTLLAKEKVDNELEFKELATMTEGYTGSDLKNLCTIAAYRPVRELIQQERLKSLVCRSKFHDDQSS* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0482 80 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 78 - -
Gso19g0482 80 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 62 IPR027417 -
Gso19g0482 80 Pfam AAA+ lid domain 28 62 IPR041569 -
Gso19g0482 80 Gene3D - 5 80 - -
Gso19g0482 80 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0482 Gso-Chr19 9405979 9408751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0482 2 65 Calmodulin-binding Proteins AT3G56690 37.500 1.98e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0482 - - gmx:100807464 123.635