Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0481 ATGGCTAAGCAATCATCCTCATCTTCCTTTAGTTACAGATTCAGCAACGATGTGTTCCTCAGCTTCCGAGGGGAAGATACTCGTCGCGGTTTTACTGGCAATCTCTATAAAGCTCTCTCTGACAGGGGAATTCACACCTTCATGGATGACAAGAAGATCCCTAGAGGGGACCAAATCACCTCAGGACTTGAGAAGGCAATTGAAGAGTCCAGAATATTCATCATCGTGCTCTCTGAAAACTATGCATCGTCCTCCTTCTGCTTAAACGAACTTGATTACATCCTTAAGTTTATTAAGGGGAAGGGCATATTGATTTTGCCAGTTTTTTATAAGGTTGACCCTTCTGATGTGAGAAACCACACTGGAAGTTTTGGAAAGGCGTTGACTAATCATGAAAAGAAGTTCAAAAGTACTAATGACATGGAGAAGCTGGAAACATGGAAGATGGCTCTGAACAAAGTGGCTAATTTATCTGGTTACCATCATTTCAAACATGGGGAAGAATACGAATATGAATTTATTCAGAGGATTGTTGAGTTGGTCTCTAAGAAGATTGATCGTGCTCCTTTACATGTTGCGGATTATCCAGTTGGACTAGAGTCACGAATACAAGAAGTAAAAGCGCTTCTGGATGTTGGATCTGATGATGTTGTCCACATGCTGGGTATACATGGGCTCGGTGGAGTAGGTAAAACGACACTTGCTGCTGCAGTTTATAATTCCATTGCTGACCATTTTGAAGCTTTGTGTTTCCTTCAAAACGTGAGAGAAACTTCAAAGAAACATGGGTTACAACATCTACAAAGAAACCTTCTTTCTGAAACGGCCGGAGAGGATAAGTTAATAGGTGTCAAACAAGGAATTTCCATAATAGAGCATAGGCTCCGGCAAAAGAAGGTTCTTTTGATTCTAGATGATGTTGACAAAAGGGAACAGCTACAGGCGCTTGCTGGAAGACCTGATTTGTTTGGTCCTGGCAGTAGAGTCATCATCACGACTCGGGACAAACAATTGCTAGCATGTCACGGTGTTGAAAGAACATATGAGGTGAATGAATTGAATGAGGAATATGCTCTTGAGTTACTTAATTGGAAAGCTTTCAAGTTGGAAAAAGTTGATCCATTTTACAAGGATGTTTTGAATCGAGCAGCAACTTATGCTTCGGGCCTTCCATTGGCTTTAGAAGTAATAGGTTCCAACTTATCCGGAAAAAATATAGAACAATGGATATCTGCTTTAGATCGATACAAAAGAATCCCTAATAAAGAGATCCAAGAGATACTTAAAGTGAGTTATGATGCTTTGGAAGAAGATGAGCAAAGTGTTTTTCTTGACATTGCTTGTTGCTTCAAAAAATATGATTTGGCAGAGATCCAAGATATACTTCATGCTCATCATGGCCATTGCATGAAACATCATATTGGAGTGTTGGTTGAAAAATCTCTCATAAAGATTAGTTTGAATGGCTATGTTACACTACATGACTTGATAGAGGACATGGGTAAAGAAATTGTTCGGAAAGAATCTCCCCAAGAGCCTGGGAAACGTAGTAGGTTATGGCTACCTACTGATATAGTTCAAGTTTTAGAAGAGAACAAGGGAACTAGTCATATTGGAATCATATGCATGAATTTCTACTCCTCATTTGAAGAAGTAGAAATACAGTGGGATGGAGATGCCTTCAAAAAGATGAAAAATCTCAAGACACTTATTATCAGAAGTGGTCATTTCTCCAAAGGTCCCAAACATTTTCCTAAGAGTTTAAGAGTATTGGAATGGTGGAGATATCCTTCACATTATTTTCCATATGATTTTCAAATGGAGAAGCTTGCTATATTCAACTTACCCGACTGTGGGTTTACTTCACGTGAGTTGGCTGCCATGTTAAAAAAGAAGTTTGTGAATCTGACAAGTCTAAATTTTGACTCATGTCAACATTTAACACAGATACCTGATGTATCTTGTGTCCCACATTTGCAAAAATTGTCATTTAAAGATTGTGATAATTTATATGCCATTCACCCGTCAGTAGGCTTCTTGGAAAAACTGAGAATCTTGGACGCAGAAGGTTGCTCCAGGCTTAAGAATTTCCCCCCAATCAAATTGACCTCTCTTGAGCAACTCAAACTTGGGTATTGTCACAGCCTTGAGAATTTTCCAGAAATATTAGGAAAGATGGAAAACATAACAGAACTTCACTTGGAACAAACTCCTGTAAAAAAATTCACTCTTTCATTTCGAAATCTTACTCGGCTTCGAACTTTATTTCTGTGTTTCCCTCGAAACCAGACAAACGGTTGTACTGGCATTTTCCTTTCGAACATTTGCCCGATGCGAGAAAGCCCGGAACTGATCAATGTCATAGGTGTGGGATGGGAAGGGTGTCTATTCCGTAAAGAGGATGAGGGTGCAGAGAATGTGAGCTTAACCACATCTTCAAACGTTCAATTTCTTGATCTCAGAAACTGCAACCTGTCAGATGATTTTTTTCGAATAGCTCTCCCATGCTTTGCTAATGTAATGAGGTTAAACCTATCAAGGAATAATTTCACAGTTATTCCCGAATGCATCAAAGAATGCCGCTTTTTAACAATGCTTGACTTGAATTATTGTGAGCGACTTCGAGAAATTAGAGGGATTCCTCCAAACTTGAAATATTTCTATGCAAAAGAATGCCTATCCTTGACTTCCTCATGTAGAAGCATGCTACTCAGTCAGGAACTGCATGAGGCTGGAGGAACCTACTTTTTGCTGCCAAGAGCCAGGATTCCAGAGTGGTTTGAGTTCCAAACATCGGAATTTCCAATTTCTTTCTGGTTTCGTAACAAATTCCCAGCCATTGCTATTTGTCATGTTATTGAACGGGTCGCTGAGTTTTCCTCATCAAGAGGTTGGACATATAGACCCGACATTAGAACCAAGGTGATCATCAATGGCAATGCAAATTTGTTTTACTCTATGGACTTGGGAAGTGATTGTTCAGTTCTTTTTGATCCGCGGGATGATAAAGTAACAGATAATTTAGATGAAGCACTTTTAGAAAATGAATGGAACCATGCAGAAGTTACATGTCCAGGTTTTACTTTTACTTTTGCCCCAACCTTTATAAAAACTGGACTACATGTATTGAAACAGGAAAGTAACATGGAGGATATTCGATTCTCTGATCCTTGTAGAAAAACAAAATTGGAGAATCATTTCAATAGTTCAAAACCAGAAAATCAAAGATGGGTGGGCAATGATGTTGCCAAGACACAAGTTGTGCAGCAGCAACAACTTATGGGCTCTTTTTTGTCACGCATGTGGCACTGGGCACTAGTGTTTCTCATTTCTTGCCGCCGCAACAATCAATGA 3354 0.3936 MAKQSSSSSFSYRFSNDVFLSFRGEDTRRGFTGNLYKALSDRGIHTFMDDKKIPRGDQITSGLEKAIEESRIFIIVLSENYASSSFCLNELDYILKFIKGKGILILPVFYKVDPSDVRNHTGSFGKALTNHEKKFKSTNDMEKLETWKMALNKVANLSGYHHFKHGEEYEYEFIQRIVELVSKKIDRAPLHVADYPVGLESRIQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLQNVRETSKKHGLQHLQRNLLSETAGEDKLIGVKQGISIIEHRLRQKKVLLILDDVDKREQLQALAGRPDLFGPGSRVIITTRDKQLLACHGVERTYEVNELNEEYALELLNWKAFKLEKVDPFYKDVLNRAATYASGLPLALEVIGSNLSGKNIEQWISALDRYKRIPNKEIQEILKVSYDALEEDEQSVFLDIACCFKKYDLAEIQDILHAHHGHCMKHHIGVLVEKSLIKISLNGYVTLHDLIEDMGKEIVRKESPQEPGKRSRLWLPTDIVQVLEENKGTSHIGIICMNFYSSFEEVEIQWDGDAFKKMKNLKTLIIRSGHFSKGPKHFPKSLRVLEWWRYPSHYFPYDFQMEKLAIFNLPDCGFTSRELAAMLKKKFVNLTSLNFDSCQHLTQIPDVSCVPHLQKLSFKDCDNLYAIHPSVGFLEKLRILDAEGCSRLKNFPPIKLTSLEQLKLGYCHSLENFPEILGKMENITELHLEQTPVKKFTLSFRNLTRLRTLFLCFPRNQTNGCTGIFLSNICPMRESPELINVIGVGWEGCLFRKEDEGAENVSLTTSSNVQFLDLRNCNLSDDFFRIALPCFANVMRLNLSRNNFTVIPECIKECRFLTMLDLNYCERLREIRGIPPNLKYFYAKECLSLTSSCRSMLLSQELHEAGGTYFLLPRARIPEWFEFQTSEFPISFWFRNKFPAIAICHVIERVAEFSSSRGWTYRPDIRTKVIINGNANLFYSMDLGSDCSVLFDPRDDKVTDNLDEALLENEWNHAEVTCPGFTFTFAPTFIKTGLHVLKQESNMEDIRFSDPCRKTKLENHFNSSKPENQRWVGNDVAKTQVVQQQQLMGSFLSRMWHWALVFLISCRRNNQ* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0481 1117 CDD AAA 197 335 - -
Gso19g0481 1117 Gene3D - 352 436 IPR042197 -
Gso19g0481 1117 PANTHER NB-ARC DOMAIN PROTEIN 19 957 - -
Gso19g0481 1117 SMART till_3 15 157 IPR000157 GO:0007165
Gso19g0481 1117 SUPERFAMILY L domain-like 554 901 - -
Gso19g0481 1117 Gene3D - 15 183 IPR035897 -
Gso19g0481 1117 ProSiteProfiles TIR domain profile. 14 185 IPR000157 GO:0007165
Gso19g0481 1117 Gene3D - 184 345 IPR027417 -
Gso19g0481 1117 Pfam TIR domain 17 184 IPR000157 GO:0007165
Gso19g0481 1117 PRINTS Disease resistance protein signature 220 235 - -
Gso19g0481 1117 PRINTS Disease resistance protein signature 294 308 - -
Gso19g0481 1117 PRINTS Disease resistance protein signature 387 401 - -
Gso19g0481 1117 PRINTS Disease resistance protein signature 678 694 - -
Gso19g0481 1117 Gene3D Ribonuclease Inhibitor 536 783 IPR032675 -
Gso19g0481 1117 SUPERFAMILY "Winged helix" DNA-binding domain 422 530 IPR036390 -
Gso19g0481 1117 Pfam NB-ARC domain 201 434 IPR002182 GO:0043531
Gso19g0481 1117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 446 IPR027417 -
Gso19g0481 1117 Gene3D Ribonuclease Inhibitor 800 910 IPR032675 -
Gso19g0481 1117 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 957 IPR044974 GO:0006952
Gso19g0481 1117 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 160 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0481 Gso-Chr19 9310350 9314995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0481 10 771 WRKY Transcription Factor Family AT4G12020 28.244 8.07e-72 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0481 - - gmx:548035 2178.29