Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0479 ATGGCTTCTTCTTGTTCCGGTTCACTACTAGTGCTTCTCTTTGTCATTTCCTCGACTCTTCTATGTTTCTCTGTGGCTTCCAATGAGTTCGAAGTTGGTGGCTCAAAAGGGTGGATTGTTCCACCTGCTAACGACACCAACTTCTTCAATGATTGGGCTTCCCAAAACAGGTTTCAGGCTGGTGACACCATTCGGTTTAAGTACAAGAAGGACTCTGTGATGGAGGTGGGAGAGGGAGATTACACACACTGCAACGCCACACACCCCACACTCTTCTCCAACAATGGCAACACTGTGTTCAAGCTTAACCACTCAGGGACCTTCTACTTCATCAGTGGTGCATCAGGGCACTGTGAGAAGGGTCAGAAGATGATTGTGAGGGTCAAGGCTGATGAGTCTCTTTCTCAGCATGCCAAGTCTTCTGGTCACCATGTTCCAGTTTCGCCAATTGGGGTCTCTCAAATGCTCTACCTTCAGTTTGTTTTGACATGTGTTGCTTCTTATGTAGTTTGA 513 0.4698 MASSCSGSLLVLLFVISSTLLCFSVASNEFEVGGSKGWIVPPANDTNFFNDWASQNRFQAGDTIRFKYKKDSVMEVGEGDYTHCNATHPTLFSNNGNTVFKLNHSGTFYFISGASGHCEKGQKMIVRVKADESLSQHAKSSGHHVPVSPIGVSQMLYLQFVLTCVASYVV* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0479 170 CDD OsENODL1_like 29 128 IPR041846 -
Gso19g0479 170 SUPERFAMILY Cupredoxins 28 128 IPR008972 -
Gso19g0479 170 ProSiteProfiles Phytocyanin domain profile. 28 130 IPR003245 GO:0009055
Gso19g0479 170 Pfam Plastocyanin-like domain 47 122 IPR003245 GO:0009055
Gso19g0479 170 PANTHER EARLY NODULIN-LIKE PROTEIN 21 9 134 - -
Gso19g0479 170 Gene3D - 26 134 IPR008972 -
Gso19g0479 170 PANTHER BLUE COPPER PROTEIN 9 134 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0479 Gso-Chr19 9187787 9189061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0479 6 128 Phytocyanin Superfamily AT3G18590 58.400 4.73e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0479 - - gmx:100815728 345.51