Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0474 ATGCGTAACCAAATCCCTAATCCATACTCATGTTCTTTAAACCAAAACTTAGAACTCCAAGCCACCACAATTGCAAGCCCAGAAACACCACCATTTGGTACTCACTTCGAAGAAGATAAGAGAGGACATAATGGAGGAAACAACGACGGTGAAGCTCACCATGCACAACCAGTAGGCAAAGGTCGTGATGGTGCCCTTCATCCTCGCACATTGGTCATCAAGGCACTTAAGAAACACAAGGGAGATAGAAAAAATACAAAGAACAATAAGCATAACGGGAACATCTCCCACGATAGAATCTTTGATATTGCGAGGGTGATGAGGTCGTGCTCCATGGCGAAGGATCTCAATGACACCATTAAGGAGATCTTGGGGACTTGTGTATCAATTGTGTGCACACTGCCAACTTCTTGA 414 0.442 MRNQIPNPYSCSLNQNLELQATTIASPETPPFGTHFEEDKRGHNGGNNDGEAHHAQPVGKGRDGALHPRTLVIKALKKHKGDRKNTKNNKHNGNISHDRIFDIARVMRSCSMAKDLNDTIKEILGTCVSIVCTLPTS* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0474 137 Pfam Ribosomal protein L11, RNA binding domain 70 130 IPR020783 GO:0003735|GO:0005840|GO:0006412
Gso19g0474 137 PANTHER - 70 134 - -
Gso19g0474 137 SUPERFAMILY Ribosomal protein L11, C-terminal domain 70 133 IPR036769 -
Gso19g0474 137 Gene3D - 69 136 IPR036769 -
Gso19g0474 137 MobiDBLite consensus disorder prediction 25 67 - -
Gso19g0474 137 MobiDBLite consensus disorder prediction 33 48 - -
Gso19g0474 137 PANTHER 60S RIBOSOMAL PROTEIN L12 70 134 IPR000911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0474 Gso-Chr19 8923448 8923861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0474 70 134 Cytoplasmic Ribosomal Protein Gene Family AT5G60670 61.538 2.91e-22 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0474 K02870 - gmx:102666726 284.648