Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0462 ATGTGGCGACAAGAATTGCATCAACAATTTGTCGAGGATGTTATGCAAATTGGACTTGATAAGGCAAAGCCAAAAAGGATTGTTGAAGCTATGAATATCCCTGGTTTGACAAGAGAGCAAGTAGCTAGTCATTTGCAGAAACATAGACATGAGTTGTTGTTGAATACATCTAAAGGAGTGACATTGCAACAGAATGAGAAGACATTGTCAAACAACATAGAATCCAAGAGAAGGGAAGGTGCATATGGAAGGTTTGACTTAACAGCTTTTGGTGATACCAGCCATCTTTCTTATGCTGCCCTTCATCCTGAGGAACGAATGGAAGACCAATGGCCTTACTATTCCCTTGCATAA 354 0.4011 MWRQELHQQFVEDVMQIGLDKAKPKRIVEAMNIPGLTREQVASHLQKHRHELLLNTSKGVTLQQNEKTLSNNIESKRREGAYGRFDLTAFGDTSHLSYAALHPEERMEDQWPYYSLA* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0462 117 Gene3D - 1 53 - -
Gso19g0462 117 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 2 73 IPR044841 GO:0003700|GO:0006355
Gso19g0462 117 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 2 50 IPR006447 GO:0003677
Gso19g0462 117 SUPERFAMILY Homeodomain-like 1 50 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0462 Gso-Chr19 8489407 8490503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0462 1 101 Response Regulator Gene Family AT3G16857 43.925 8.79e-19 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso19g0462 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0462 - K14491 gmx:106797432 240.736