Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0437 ATGGCCACTGAACAGAATGTTTCCTTCCAATTCGAAGGTCTTTGGGTCGTAGCGGTTGATGATGACACCACTATTCTTGAAATCATTAAACAAATGGGTTTTAAATGCCATTATCGTGTTGCCACATTCTCTGATGCCCCAGATGCTTTGAATTATGTTCTGGAGAATAAAGATCGCATTGATGTGATACTCGTTGATGTTCACTTGCCAAATATGGATGGCTATGAATTCCTTAAGCATATCAATAAGGAAATTGATATCCCTGTCATCATCATGTCTGTTGATGGTTCTACGAGTGCTGTGAGGAAGGCTATTACACATGGGGCATGTGATTATTGGACCAAGCCTTTCAGTGAGAACCAATTCAAGATTATGTGGAAGCATGTTGCTATGAAAGCCTGGAATGAAAGAAGCTACAAAAAAAAGATTTTCTGA 435 0.3931 MATEQNVSFQFEGLWVVAVDDDTTILEIIKQMGFKCHYRVATFSDAPDALNYVLENKDRIDVILVDVHLPNMDGYEFLKHINKEIDIPVIIMSVDGSTSAVRKAITHGACDYWTKPFSENQFKIMWKHVAMKAWNERSYKKKIF* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0437 144 Gene3D - 15 142 - -
Gso19g0437 144 SMART REC_2 14 126 IPR001789 GO:0000160
Gso19g0437 144 SUPERFAMILY CheY-like 12 130 IPR011006 -
Gso19g0437 144 CDD REC_typeB_ARR-like 16 130 - -
Gso19g0437 144 Pfam Response regulator receiver domain 16 122 IPR001789 GO:0000160
Gso19g0437 144 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 10 138 - -
Gso19g0437 144 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 138 IPR045279 GO:0009736
Gso19g0437 144 ProSiteProfiles Response regulatory domain profile. 15 130 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0437 Gso-Chr19 7935171 7936107 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0437 14 136 Response Regulator Gene Family AT4G16110 45.528 3.74e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso19g0437 Response_reg 2.1e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0437 - K14491 gsj:114398561 300.056