Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0436 ATGCATATTGGGCTTGACAAGGCACAGCCAAAGAAGATTCTTGAAGTGATGAACATTCCTGGTTTGACAAAAGACCATGTTGCCAGTCATTTGCAGAAATATAGATTTGATTTGAAGAAATCTAATGAAGTGGCTGTGCAACAGAATGAGATGCAATTGCCAAACAGTATACAATCAACAGAACCTATTGATTGGTTTAATCCTGAGGGTTGGACCAGTCAACCTGATGAATCTATCTTGGAAAGTGTTTCTGTTCAATCTCAGAATCAGCAACAAGGAGGAGGATCTTTGCATGTCTTGCCACCACCACTAGATGGATTTCGAATTCAAACAGATTGGTGTAATATGAATTTCTGA 357 0.3894 MHIGLDKAQPKKILEVMNIPGLTKDHVASHLQKYRFDLKKSNEVAVQQNEMQLPNSIQSTEPIDWFNPEGWTSQPDESILESVSVQSQNQQQGGGSLHVLPPPLDGFRIQTDWCNMNF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0436 118 MobiDBLite consensus disorder prediction 81 101 - -
Gso19g0436 118 SUPERFAMILY Homeodomain-like 3 40 IPR009057 -
Gso19g0436 118 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 101 - -
Gso19g0436 118 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 2 36 IPR006447 GO:0003677
Gso19g0436 118 MobiDBLite consensus disorder prediction 81 96 - -
Gso19g0436 118 Gene3D - 1 41 - -
Gso19g0436 118 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 2 101 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0436 Gso-Chr19 7934191 7935172 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0436 3 50 Response Regulator Gene Family AT2G01760 56.250 2.40e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso19g0436 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0436 - - gsj:114399883 237.654