Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0434 ATGTACACCTCGAGGAAGAAAATTCACAAGGATAAGGATGCCGAGCCCACTGAATTTGAGGAGACAGTTGGACAGTACTTGTTCGACTTGGAGAACACCAATCAGGATCTGAAAAGTGACTTGAAAGATCTCTACATAAACCAAGCTATTCAAATGGATGTGGCTGGTAATCGCAAGGCTGTAGTCATCTATGTGCCTTTCAGATTGAGGAAGGCATTCCGCAAGATTCATCTTCGACTTGTCAGAGAGTTGGAGAAGAAGTTTAGTGGGAAGGATGTTGTCTTGATTGCCACAAGGAGGATCGTGCGACCGCCAAAGAAAGGCTCTGCTGTTCAGCGACCCCGAACCCGCACTTTGACCGCTGTCCATGATGCCATGCTGGAGGATGTTGTGTATCCTGCAGAGATTGTTGGCAAACGGGCCAGATATAGAATTGATGGCTCAAAAATAATGAAGGTTTTCTTGGACCCCAAGGAGCGCAACAACACTGAGTACAAGCTGGAGACCTTTTCTGGAGTTTACAGGAAGCTTACTGGAAAAGATGTAGTATTTGAGTATCCAATCTCAGAAGCCTGA 576 0.4583 MYTSRKKIHKDKDAEPTEFEETVGQYLFDLENTNQDLKSDLKDLYINQAIQMDVAGNRKAVVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRTRTLTAVHDAMLEDVVYPAEIVGKRARYRIDGSKIMKVFLDPKERNNTEYKLETFSGVYRKLTGKDVVFEYPISEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0434 191 Coils Coil 27 47 - -
Gso19g0434 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso19g0434 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 190 - -
Gso19g0434 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso19g0434 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0434 Gso-Chr19 7921690 7924148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0434 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 82.199 7.28e-118 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0434 K02993 - gmx:100305484 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0286 13 13981179 13983567 Gso19g0434 19 7921690 7924148 GST