Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0409 ATGGCTAATGGTTCATTGGATAAATGGATATTCAACAAGAACAAAGAGGAGTTTATGTTGGATTGGGATACAAGGTATAACATAGCACTTGGAACAGCAAAAGGACTTGCTTATCTACATGAAGATTATGAGTCAAACATTATTCATTGTGACATCAAACCAGAAAACGTGCTCCTAGATGATAATTTCAGGGTCAAGGTTTTTGATTTTGGTTTGGCTAAGCTCATGACACGTGAACAAAGGCATGTGTTCGCAACACTTAGAGGCACTACAGTGTATCTTGCACCTGAGTGGATCACAAACTGTGCCATATAA 315 0.3841 MANGSLDKWIFNKNKEEFMLDWDTRYNIALGTAKGLAYLHEDYESNIIHCDIKPENVLLDDNFRVKVFDFGLAKLMTREQRHVFATLRGTTVYLAPEWITNCAI* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0409 104 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Gso19g0409 104 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 104 - -
Gso19g0409 104 Gene3D Transferase(Phosphotransferase) domain 1 1 104 - -
Gso19g0409 104 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 104 - -
Gso19g0409 104 Pfam Protein kinase domain 2 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0409 104 ProSiteProfiles Protein kinase domain profile. 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0409 104 SUPERFAMILY Protein kinase-like (PK-like) 1 102 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0409 Gso-Chr19 7294417 7294731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0409 1 99 Receptor kinase-like Gene Family AT5G20050 50.000 8.70e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso19g0409 Pkinase 5.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0409 - - gmx:100787500 199.134