Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0385 ATGGATCCCTCACGCCGTGCCCCACGCGCCGTGATCGACCCTATACCGAAGATCCGCCAAGTGGGGTTCTTTGCCCCGCCCGAGCGCTCTCAGTCGGGTCCTCCCGACCCGACCCACTCCTCTCCCCCGATCTCCAGCTCCCTCTCCCCGGTCATGATCCCGCCCCCGCGCCACCTCTCCGACAACCTCCTTCTCCACGCCCCCCGCCCCGCCTCCTCCCCCCTCTCCGCCGCCGCTGCCGCCGGAGGAAGCGGAAACTCCTTTGACTACGGCGCGGTCTTCTTCCCCGCCCCGCTCTCTCCCGCGATACCGTCGTCTTCGTACTCCAGCAGAATCATCGCCACCACCGGCGAGGGAGGGTTCTTCAAGGGGAACGGCGCCGGCGGCGGAAAGGTGGCGGCGTCATCGTTCCCTCGCGGAGGATTCGACTTGACGGCGATGAAGAAGGCGGCGGCGGCGAGTGTTGTGGTGCCGGCGAGCGAGTTGACTACGGTTTCCGTGGTAAATGATTCGCTCGGGATTCCTGAAAAAGAAAAAGGAAATAAAGCAGGAGGGTCAGCAGTGGAAGTGAAAGACCAACCTAATAGTTCAAAGCAGCAGAAACCCAAACTCTCAAAAGCTGAAAGACGTGCACTCCAAGAATCTCAACGGGCTGCAAAGGCTGCTGCAAAAGGTGAAGGAAGTAAGGCATCTGGAACTGTGGCTACAATGAATGCAAAACCAGCTAAAGCTGTAAAGCCTGCACAGAAAGTTGATAATGCAGCAGTTGCAGCGTCTGAAAAGAAGGGAGGTGAGATTCCACCAGAAAAGGATAGAAAGAAAGATGCTCCTCAACCACGCATGCAGTATGACGACAAGAGTCGAGTGGAGAAAGCTAAACGTCGTGCAGTGGTGAAACAAACTGAAGCTAGGAATAGAGTTGAGTTGTTCAGGCATTTGCCACAATATGAGCATGGGAGTCAGCTTCCAGATCTCGAGGCAAAGTTTTTCCATCTTTCTCCAGTGCACCCTTCTGTTTATAAGGTGGGTTTGCAATATCTAACTGGAGATATAGCTGGTGGCAATGCTCGTTGTATTGCAATGCTTCAAGCATTCCAAGAGGCCATCAAAGACTACAAGGTTCCACATGAGAAGACTCTTGTGAGAGACTTGACAGCAAAAATTAGTAGTTATGTATCATTTCTTATTGAATGTCGGCCTCTGTCAATCAGCATGGGAAATGCAATTCGGTTTCTTAAAAGTCATATAGCCAAGCTACCTTTGACCTTGTCTGAATCAGAAGCAAAAGCTTCTCTCCAGTCAGATATTGAGCGTTTTATAAGTGAAAAGATTATACTTGCCAACAAGGTGATAGTGAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACATATGGGTCCTCATCAGCTGTTGAAATGATACTATTACATGCACATGAGTTGGGGAAGCAGTTTCGTGTTGTCGTAGTTGACTCTCGTCCAAAGCTTAGAGGGCAACTCTTACTTCGCAGGCTTGTGGAGAAAGGTCTTAGCTGTACATATACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACTCGGGTTTTTCTGGGTGCTTCAGCAGTTTTGTCTAATGGAACAGTATATTCAAGAGTAGGGACTGCATGTGTTGCAATGGTTGCTCATGCATTCCGTGTACCTGTCATAGTATGTTGTGAGGCCTATAAATTTCATGAACGGGTACAGTTGGATTCAATATGCTCAAATGAACTTGGCAATCCAGATGTCATTTCAAATGTACTGGGTAGAGAGGATGTAAAACACTTGGATGGCTGGGCCAATATTGAAAATCTGCAACTTTTAAATCTGGTTTATGATGCAACACCTTCAGATTATGTTTCAATGATTGTCACAGATTATGGCATGGTTCCCCCCACAAGTGTGCCTGTGATTGTAAGAGAATATGGGAGAGAACAGGTCTGGATATAA 1983 0.4861 MDPSRRAPRAVIDPIPKIRQVGFFAPPERSQSGPPDPTHSSPPISSSLSPVMIPPPRHLSDNLLLHAPRPASSPLSAAAAAGGSGNSFDYGAVFFPAPLSPAIPSSSYSSRIIATTGEGGFFKGNGAGGGKVAASSFPRGGFDLTAMKKAAAASVVVPASELTTVSVVNDSLGIPEKEKGNKAGGSAVEVKDQPNSSKQQKPKLSKAERRALQESQRAAKAAAKGEGSKASGTVATMNAKPAKAVKPAQKVDNAAVAASEKKGGEIPPEKDRKKDAPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFHLSPVHPSVYKVGLQYLTGDIAGGNARCIAMLQAFQEAIKDYKVPHEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSHIAKLPLTLSESEAKASLQSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPKLRGQLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASAVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGNPDVISNVLGREDVKHLDGWANIENLQLLNLVYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0385 660 MobiDBLite consensus disorder prediction 174 298 - -
Gso19g0385 660 SUPERFAMILY NagB/RpiA/CoA transferase-like 334 653 IPR037171 -
Gso19g0385 660 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 1 660 - -
Gso19g0385 660 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 660 - -
Gso19g0385 660 Gene3D - 446 653 IPR042529 -
Gso19g0385 660 MobiDBLite consensus disorder prediction 1 66 - -
Gso19g0385 660 Pfam Initiation factor 2 subunit family 351 643 IPR000649 GO:0044237
Gso19g0385 660 MobiDBLite consensus disorder prediction 263 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0385 Gso-Chr19 6606418 6612575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0385 4 660 Eukaryotic Initiation Factors Gene Family AT5G38640 63.864 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0385 K03680 - gmx:100775998 1136.32