Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0382 ATGTTTCGGATAAGCAAGATGCACGCCAAAGGTTCTAATCTCGGGAATAGTTGCAAACAAACACCAGGAAGTTCTTCATCATTTGTCCCAAACCATCCTTTGCAGAGAGATTTTGATTTAAGACATCAAGATTATATAATGAATCAAGCAAGGTTCTTCTTTGACTGGCGAAAAGATCCTGAAATTAGCCAATGCCGTAACTTGATAAAAAATGATATTTCTACAATTTTGCATTCCCGACATCCTAATGATCAAGGACAGGCCTCTGTTTTGGCAAACTTTCTGGAAAATCGGCTATTTGTTGAGGCTGCTTCAAAGGATGAGTATATCAACCGACAGACAATTATGCAACGATTGGATACACAACTCAAGAAGTTGTATGCCCCAAAATGCAGCCAAGTAAATAGCTCTATTGCTTGCACATCCCAGATGGTGCCCTCTTTTGGGTTATTGCAAGCTAGGTCTAATGGAAGTGTACCAGAACCTGCTTTTCATAACGTGGCTGGTCCTATCACCAATGCAACCAATTATTGTGCAGTGCCTGTAGATAATAAAAATAGCTTCCCAAATGGAGGGTTGTCTTATTCTTCTTTTGTTCCCCAACCGGTTTTTTTACCAGATAACCATCCATCCATCGCTACATGCACTGATTTGGATGTGCTTCCTAACTCTTTTGTTTCTGGTGGGAGAAGCAATTTGAAAGCTTGCTCCAAGTCAATTAGTTCCTATTTTCCTCAGCGACAGGCAGACGATTGGAAGACGCTTCTGGTGAAGTATGGAGATTGTTCTAGGACTACAACGGGAAAATCCGTCCAATCTGAATCTTCAAATTTGATGACCCCTCAAGATGCCTTGAGGGAATTTTCAAAAGTTTTTGATCTTCCTCCTGTCCCGAGAAGCCTAGGAGATATTAGGCAACATCAACACCGGAAGCGAGATTTTCAACGGAATTTAAAACCTTTTATGCAGCCATATGGGCTTCCTGGTAAAACTAATATGGCCCAGCCTAATGCATTCTCCAATCAAGGTGAACGTTGCAGTCAAATGTTGGGGCATAAAACATTGAAACAACCACAACTTTTCAAAAGAAGTCTCAATGGGGATCAACAGTTCACTTCAGGGAGCTCAGTAGATCTTTTTGGTTTAGATGATTCTGATAATATGAATTCATGTGGTAGTTCCAAAGTTTCGGTTGAACAGAGGATCATGCTTGAATATCTTTATTTGAAGAATTTTAACAATATTTCACGGGGTAATGTTATGAAATATCTGCATTCAACAGTTTGTCTTAAAGGGACATGTAATTGTGGATGGTATATCAAGCTATTATTGCATTTTGATGACTGTAAAGATGATGGTTGTCGTACGTGTTACTCTTGGAAATTGCATGGCACTGATATTCTTGGGGGTCATTTGAAATTTCCTGATATTATGGGTTCTGTTGAAAGAAAAAATGACGCTCCTTCTGGAAATACTGAAGCCATGCTACCACCTGAAAAAAGAAGAAAAATGGAGCCCGCTTTTGGTGTCCCTTTAATTAATAATGCAAGTTTGGATCAGTCGACTCAGAAAATGGTTCACCCTCGTTCTTCTGAAGCTCTTTCAGAATTGCCATTGAGCCAAAAAGCTGATCAAGAGATGGAGATGTCACCAAATCCAACAGCTAATAGTGTACATATGGAGGACAATCAAGGAAAAATCAGGTTGAACCAAGATGAGATAAATGCTACAAAAGAAGCCATTAAGCCAAAAGTTGATGAAGAGAAGGAAAGGAAGTCCCCAAATCCAACACTTAATACTGCATATATGGAAGACATAAAAGGCAGAATTGAATTGGACCAGGATGAGATAAATGCTACAAAAGAAATCATTGAGCCAAAAGTTGATCAAGAGATGGAAAGGATGTCCCAAAATCCAACAGTTACTGTAGATATGGAGGGCATACAAGCCATAACCGGGTTCAACCAGGATGGGATAAATGCCACAAAAGAAGTCATTGAGCCAAAATTTGATGAAGAGAAGGAAAGGAAGTCCCCAAATTCAATAGTTAATACTGCAGATAAAGAGGACACACAAGGCAGAACTAAGTTCATCCAACATGGAATAAATGTTGATCTAGAGATGGAAAGGAAGTCCTCAAAAACAACAGTTAATACTGTTTCCTTAATTGATTTTTTCACAAGTAATCAAATAAAGGAACACATTACAAGCCTGAGAAAGCAATTTAATCAGAGTACAATGGTTGAAGAATCAGGAAGTGATGTTTACACATGCCAATTATGTGGAATGGGAACACTTTCTTTTGCCCCCGTGCCAATCTATTGCTTTTGTTGTGGCATCCGCATCAAGCGAAACGCATGCTATTACTATAGAAGAGAAGAAGATGATACACAGCATTGCTTTTGCAGTGTTTGCTTTAGGACTTCTCGAGGTGGGAACATCAAATTCAATGGAACATCTGTTTCCAAGACAGATCTTGATAAAAAGACAAATAATAGAGAATTTGAAGAATCGTGGGTTGAATGCAATAAATGCAAATGTTGGCAGCATCAAATATGTGCACTCTACAACGATAAAAGAGATTTGGACTACAGAGCTGAGTATACATGTCCTATATGCCGCTTAAAGGAAATTGGAAATGGAATGCATGCACCCTTACCGAAGACAGCGGCTATGTTTAGTGCTAATGACTTGCCCAGAACCATGCTTAGCGACCACATAGAGAGCAGACTTTTTAAGCGTCTCTGGCAAGAGGATGAAGATTGGGCAAAAGCAGGGTATAAGAATCTTGATGAGGTTTTCGAAGCAGAAAGTCTTTCTGTTAGAGTTGTGTTATCCGTTGACAAACAATTGAAAGTGAAGAAACAGTTTCTGGACATATTTGGGGAGGAGAATTACCCTTCTGAATTTCCTTATACATTAAAAGTTATTCTTCTGTTTCAGAAGATTGAAGGAGTGGATGTATGCCTTTTCGCAATGTATGCTCAGGAGTTTGGCTCAGAATGTGGCTATCCTAATCAGCGTTCTGTGTACATTTCATATCTCGATTCTGTCAAGTATTTTAGGCCTAAAAGAGTGACTAAAAGTGGAGAAGCTCTTCGTACCATCGTTTACCATGAGATATTGATTGGATATCTTGATTTTTGCAAGAAACGAGGTTTCACAACTTGCTATCTATGGGCCTGTCCACCTATGAAGGGAGAAGATTATTTACTATATTGTCATCCTGACACCCAAAAAACTCCCAAGAAAGATAAATTACGGCAGTGGTATCATTCAATGCTAAGAAAGGCCGCTGAAGAAAATATCGTTGTTGGTTTAACTAACTTACATGATCATTTCTTTGTTACTACTGGAAGTTGTGACTCCAAGGTAACAGCTGCTCGTTTGCCTTACTTTGATGGGGACTTCTGGTCTGGTGCTGCTATGGATAAAGCCAGGCACATTGAACAAGAGTGTGGAGGAGATTATAAAATGATCTTCGATAAAGTAGTATCGAAAAGATGTTTAAAGTCCATGGGACATGTAAATCCTCCTTCTGAAGGAACTGCCAAAGACATTCTAGTGATGCATAAATTGGGACAAACCATATTACCTTTCAAGGAAGATTTTCTCGTAGTTCAATTTCAGTATGTTTGCATGCACTGCCATGAAGTAATAGCAAATGGGAAGCGATGGTTTTGCACCGAATGCAAGAAATTTCAGGAGTGTGAAAGATGCCATACTGTTCACTCACACATTTCAGCCAAAGGCGAGAGGCATAGACTTCATCAGGTCCTCATGGATGACGTCCTTGGTGATACTAAGGAGAATGATATCATCCTTGATAATGGGTTATTTGATTCCCGACACAACTTTCTGAGCTTTTGCCAAAGGAACAGGTTTCAGTTTGACTCACTCCGCAGAGCCAAGTATTCCTCAATGATGATCCTCTACCTTGTGAAGAATCCTACTCTTCTGATTGTTGGAACAACATGCCGCGTTTGCTCTAAAAACAATGTGTCCCAGCGCTACTGGAAATGTGAGAATTGCCCGGAATTCACTGTCTGTTCTGCATGCTACAACGAGAGAGGTGCTAGTTGCCATGCACACACGTTGAGTGAAGCTTATTCACCAGCGCAATCTCCTTCAGGGAATCAAGAATTGCAGCAGAACTCAGCAATGTTGCAGCAACTTCTGGATGTTATTGAACATGCATCTCTGTGTCACTCAATCAAAACTCAACCATGCACTTACCCACATTGCAGTCAAATTAAAAAGCTGTTCGCTCATGCCAGTAGGTGTGAAGTTCGACTTTCTGGGGGGTGCCAATTTTGTAAGAAGGTTTGGCAGGGACTGACTTTACACTCAAGGAATTGCAAAGACTCAGCATGTCGCATACCCCGTTGCATGGATCTGAAGAAACAAATAGAATGGATAGCAACACAAGCTGAATCGCGGCTTAGGGCTGCAGTTTTGCAATCGGAAGATAGCAGATAA 4479 0.4014 MFRISKMHAKGSNLGNSCKQTPGSSSSFVPNHPLQRDFDLRHQDYIMNQARFFFDWRKDPEISQCRNLIKNDISTILHSRHPNDQGQASVLANFLENRLFVEAASKDEYINRQTIMQRLDTQLKKLYAPKCSQVNSSIACTSQMVPSFGLLQARSNGSVPEPAFHNVAGPITNATNYCAVPVDNKNSFPNGGLSYSSFVPQPVFLPDNHPSIATCTDLDVLPNSFVSGGRSNLKACSKSISSYFPQRQADDWKTLLVKYGDCSRTTTGKSVQSESSNLMTPQDALREFSKVFDLPPVPRSLGDIRQHQHRKRDFQRNLKPFMQPYGLPGKTNMAQPNAFSNQGERCSQMLGHKTLKQPQLFKRSLNGDQQFTSGSSVDLFGLDDSDNMNSCGSSKVSVEQRIMLEYLYLKNFNNISRGNVMKYLHSTVCLKGTCNCGWYIKLLLHFDDCKDDGCRTCYSWKLHGTDILGGHLKFPDIMGSVERKNDAPSGNTEAMLPPEKRRKMEPAFGVPLINNASLDQSTQKMVHPRSSEALSELPLSQKADQEMEMSPNPTANSVHMEDNQGKIRLNQDEINATKEAIKPKVDEEKERKSPNPTLNTAYMEDIKGRIELDQDEINATKEIIEPKVDQEMERMSQNPTVTVDMEGIQAITGFNQDGINATKEVIEPKFDEEKERKSPNSIVNTADKEDTQGRTKFIQHGINVDLEMERKSSKTTVNTVSLIDFFTSNQIKEHITSLRKQFNQSTMVEESGSDVYTCQLCGMGTLSFAPVPIYCFCCGIRIKRNACYYYRREEDDTQHCFCSVCFRTSRGGNIKFNGTSVSKTDLDKKTNNREFEESWVECNKCKCWQHQICALYNDKRDLDYRAEYTCPICRLKEIGNGMHAPLPKTAAMFSANDLPRTMLSDHIESRLFKRLWQEDEDWAKAGYKNLDEVFEAESLSVRVVLSVDKQLKVKKQFLDIFGEENYPSEFPYTLKVILLFQKIEGVDVCLFAMYAQEFGSECGYPNQRSVYISYLDSVKYFRPKRVTKSGEALRTIVYHEILIGYLDFCKKRGFTTCYLWACPPMKGEDYLLYCHPDTQKTPKKDKLRQWYHSMLRKAAEENIVVGLTNLHDHFFVTTGSCDSKVTAARLPYFDGDFWSGAAMDKARHIEQECGGDYKMIFDKVVSKRCLKSMGHVNPPSEGTAKDILVMHKLGQTILPFKEDFLVVQFQYVCMHCHEVIANGKRWFCTECKKFQECERCHTVHSHISAKGERHRLHQVLMDDVLGDTKENDIILDNGLFDSRHNFLSFCQRNRFQFDSLRRAKYSSMMILYLVKNPTLLIVGTTCRVCSKNNVSQRYWKCENCPEFTVCSACYNERGASCHAHTLSEAYSPAQSPSGNQELQQNSAMLQQLLDVIEHASLCHSIKTQPCTYPHCSQIKKLFAHASRCEVRLSGGCQFCKKVWQGLTLHSRNCKDSACRIPRCMDLKKQIEWIATQAESRLRAAVLQSEDSR* 1493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0382 1492 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 834 877 IPR013083 -
Gso19g0382 1492 PANTHER CBP/P300-RELATED 603 1468 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gso19g0382 1492 SUPERFAMILY FYVE/PHD zinc finger 835 876 IPR011011 -
Gso19g0382 1492 SUPERFAMILY TAZ domain 1384 1468 IPR035898 -
Gso19g0382 1492 MobiDBLite consensus disorder prediction 545 561 - -
Gso19g0382 1492 Gene3D - 1206 1260 IPR043145 -
Gso19g0382 1492 SMART PHD_3 801 874 IPR001965 -
Gso19g0382 1492 SUPERFAMILY RING/U-box 1188 1254 - -
Gso19g0382 1492 MobiDBLite consensus disorder prediction 1 32 - -
Gso19g0382 1492 ProSiteProfiles Zinc finger ZZ-type profile. 1321 1374 IPR000433 GO:0008270
Gso19g0382 1492 Coils Coil 1379 1399 - -
Gso19g0382 1492 ProSiteProfiles Zinc finger PHD-type profile. 799 876 IPR019787 -
Gso19g0382 1492 SUPERFAMILY RING/U-box 1303 1357 - -
Gso19g0382 1492 MobiDBLite consensus disorder prediction 10 32 - -
Gso19g0382 1492 Gene3D - 1319 1371 IPR043145 -
Gso19g0382 1492 Pfam Histone acetylation protein 935 1139 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gso19g0382 1492 SMART TAZ_2 1383 1464 IPR000197 -
Gso19g0382 1492 MobiDBLite consensus disorder prediction 542 561 - -
Gso19g0382 1492 CDD PHD_HAC_like 801 873 - -
Gso19g0382 1492 ProSiteProfiles Zinc finger ZZ-type profile. 1208 1267 IPR000433 GO:0008270
Gso19g0382 1492 PANTHER HISTONE ACETYLTRANSFERASE HAC2 603 1468 - -
Gso19g0382 1492 SMART zz_5 1207 1250 IPR000433 GO:0008270
Gso19g0382 1492 SMART zz_5 1320 1364 IPR000433 GO:0008270
Gso19g0382 1492 SMART KAT11_2 928 1220 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gso19g0382 1492 Gene3D TAZ domain 1378 1492 IPR035898 -
Gso19g0382 1492 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 892 1319 IPR031162 GO:0004402
Gso19g0382 1492 ProSiteProfiles Zinc finger TAZ-type profile. 1375 1466 IPR000197 -
Gso19g0382 1492 Pfam TAZ zinc finger 1389 1463 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0382 Gso-Chr19 6553946 6564605 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gso19g0382 HAT_KAT11 4.4e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0382 K04498 - gmx:102664049 3094.29