Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0354 ATGGATGACGTCCTTGGTGATACCAAGGAGAATGATATCATTCTTGATAATGGGTTATTTGATTCCAGACACAACTTTCTGAGCTTTTGCCAAAGGAACAGGTTTCAGTTTGACTCACTGCGCAGAGCCAAGTATTCCTCAATGATGATCCTCTACCTTGTGAAGAATCCTACTCTTCTGACTGTTGGAACAACATGCCGCGTTTGCTCTAAAAACAATGTGTCCCAGCGCTACTGGAAATGTGAGAATTGCCCTGAATTCACTGTCTGTTCTGAATGCTACAACGAGAGAGGTGCTAATTGCCATGCACACACGTTGAATGAAGCTTATTCACCAGCACAATCTCCTTCAGGGAATCAAGAATTGCAGCAGAACTCAGCAATGTTGCAGCAACTTCTGGATGTTATTGAACATGCATCTCTGTGTCACTCAATCAAAACTCAACCATGCACTTACCCACATTGCCGTCAAATTAAAAAGCTGTTCGCTCATGCCAGTAGGTGCGAAATTCGATTTTCTGGGGGGTGCCAATTTTGTAAGAAGGTTTGGCAAGGACTGACTTTACACTCAAAGAATTGCAGAGACTCAGCATGTCGCATACCCCGTTGCATGGATCTGAAGAAACAAGTAGAATGGATAGCAACGCAATCTGAATCGCGGCTTAGGGCTGCAGTTTTGCAATCGAAAGATAGCAGATAA 699 0.4363 MDDVLGDTKENDIILDNGLFDSRHNFLSFCQRNRFQFDSLRRAKYSSMMILYLVKNPTLLTVGTTCRVCSKNNVSQRYWKCENCPEFTVCSECYNERGANCHAHTLNEAYSPAQSPSGNQELQQNSAMLQQLLDVIEHASLCHSIKTQPCTYPHCRQIKKLFAHASRCEIRFSGGCQFCKKVWQGLTLHSKNCRDSACRIPRCMDLKKQVEWIATQSESRLRAAVLQSKDSR* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0354 232 PANTHER CBP/P300-RELATED 3 227 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gso19g0354 232 Gene3D - 58 111 IPR043145 -
Gso19g0354 232 ProSiteProfiles Zinc finger TAZ-type profile. 115 206 IPR000197 -
Gso19g0354 232 SUPERFAMILY RING/U-box 42 112 - -
Gso19g0354 232 ProSiteProfiles Zinc finger ZZ-type profile. 61 114 IPR000433 GO:0008270
Gso19g0354 232 Pfam TAZ zinc finger 129 203 IPR000197 -
Gso19g0354 232 PANTHER HISTONE ACETYLTRANSFERASE HAC12 3 227 - -
Gso19g0354 232 SUPERFAMILY TAZ domain 124 208 IPR035898 -
Gso19g0354 232 Gene3D TAZ domain 117 232 IPR035898 -
Gso19g0354 232 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1 59 IPR031162 GO:0004402
Gso19g0354 232 Coils Coil 119 139 - -
Gso19g0354 232 SMART TAZ_2 123 204 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0354 Gso-Chr19 5901236 5902315 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gso19g0354 zf-TAZ 9.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0354 K04498 - gsj:114398520 491.115