Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0353 ATGAAGGTGCTCGATAGAAGCACCATCATCAAGCACAAGATGGTCGACCAGATCAAGAGGGAGATTTCGATCATGAAGCTAGTTAGGCACCCTGATGTTGTTCGCCTGCACGAGGTTCTTGCAAGCCGTACTAAGCTTTATATTATATTGGAGTTCATCACGGGTGGTGAGTTGTTTGATAAAATTATACACCATGGACGCCTTAGTGAAGCTGACTCTAGAAGATATTTCCAACAGCTTATTGACGGTGTAGATTATTGCCACAGTAAGGGAGTTTATCACAGAGATTTAAAGCCTGAAAATCTTTTACTTGATTCACTAGGAAATATAAAGATTTTCGATTTTGGTTTGAGTGCATTTCCTGAGCAGGGGGTGAGTATCCTTCGGACAACTTGTGGGACTCCGAACTATGTGGCTCCTAAGGTACTCAGTCATAAGAGTTACAATGGTGCTGTGGCAGATGTTTGGTCCTGTGGGGTTATCCTCTTTCTCCTACTGGCTGGATATCTTCCTTTTGATGAGCTTGATCTAACCACCTTATATAGTAAGATTGAGAGAACAGAGTTTTCATGCCCTCTTTGGTATCCAGTGGGAGCAAAAATGTTGATATATAGAATTTTGGACCCAAATCCTGAAACTATTGAGACATTCACAAAAGTTGGACAATTGGAAAAGGCCAGTGATGCTGAAGAGTATTCAAGTTGA 705 0.4142 MKVLDRSTIIKHKMVDQIKREISIMKLVRHPDVVRLHEVLASRTKLYIILEFITGGELFDKIIHHGRLSEADSRRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSLGNIKIFDFGLSAFPEQGVSILRTTCGTPNYVAPKVLSHKSYNGAVADVWSCGVILFLLLAGYLPFDELDLTTLYSKIERTEFSCPLWYPVGAKMLIYRILDPNPETIETFTKVGQLEKASDAEEYSS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0353 234 Gene3D Transferase(Phosphotransferase) domain 1 1 231 - -
Gso19g0353 234 PIRSF ILK 1 231 - -
Gso19g0353 234 PANTHER SERINE/THREONINE KINASE 1 228 - -
Gso19g0353 234 ProSiteProfiles Protein kinase domain profile. 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0353 234 SUPERFAMILY Protein kinase-like (PK-like) 1 214 IPR011009 -
Gso19g0353 234 Pfam Protein kinase domain 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0353 234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
Gso19g0353 234 SMART serkin_6 1 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0353 234 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 8 1 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0353 Gso-Chr19 5896343 5899915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0353 1 224 CBL-interacting serine-threonine protein kinases AT4G24400 78.571 8.54e-133 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso19g0353 Pkinase 2.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0353 - - gmx:100784566 473.396