Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0348 ATGGCTCACCCTGCTGATCTTTGTCAAAAGCTGAAAGTCATAGAGCAATGTCAAGTTTCTCCTCCACCAGGTTCGGTTCCTCCAACCTCTCTTCCACTAGCCTTCCTTGACCTTCCTTGGGTTTACTGTGACACAGTGCAAAGCATTTTCTTCTTTGAGTTTCCTCACTCTTGTAACCACTTCTTGCAAACAGTGCTTCCAAATCTCAAACACTCTCTTTCCCTCACTCTCCAACAATTCTTCCCCTTCGTTGGAAACCTTGTGATCCCTCCTAAACCTAACTTCCCTCACATTCTCTACACCTCTGAAAACTCCATCTCCTTCACGATTGCAGAATCCACTGCCGACTTTCCACATCTCATAGCTGACACCGCTAGAGATGTTAAAGACTCGCACCCTTTTGTTCCTATCTTACCTACCCCAACTACCAAAGAAGATGGCACATGGTTGCTTCCTCTTATGGCCATTCAACTCACCATTTTCCCCGAGTATGGCTTCAGCATTTGCATCAGTTTTAGACACGTTGTTGCTGACGCAAGAGCATTCTTACATTTCATGAAGTTCTGGTCCTATGTTTGTAGGACAAAACATGACGTGGCAGCTACTCAAGATTTGTTACCACTGCTCAACAGGGACATCATCAAAGACCCCAAAGGGCTTAAATTCGTTTTCTCGGAGGAACTATGGAATTCTCCTATAGAAAGCATAATAAAAACACCTCCAAAAGTTGTCGACAAAAACGATGACAAAGTCCGTCACGCGTTTGTGTTGAGGCGTGACCATGTTGCGAAGCTAAAGAAATGGGTGTCGATTGAATGTAAAAGTACTTATGGGTTAGAATTAGAGTCATTGCACATATCAACCTTTGTTGTGACAAGTGCTTTGATGTGGGTTTGCAAGGTTCAATCAGAAGAAGAGGTCAATGCTATCACTATTGCAAATAATAATAATAATGATGAAATCTACAGCTTGAAGTTTCTGGGAGATTGCCGTAACCGTCCCGAATTTTCGATTCCTTCAACGTACTTTGGAAACTGCATTGTCATTCGCATTGTGTCACTAAACAGGAGCAAGCTAATGGGAGAAAAAGGAATTGTTGAGGCAGCGATTAGTATTGGAAGGGCAGTTAGAGATTTTCAGTTTGATGCTATGAAAGACGTTGAAAATTTTATGTCTCTCGGTAGAAGTGGAAGAAAAGTGAAACATTCGTCTACAATTGCAGGGTCGCCAAAGCTTGGAACATATGAGACTGATTTTGGGTGGGGAAAGCCCAAGAAGTGTGAAATACTTCACATAGAATATTCAAGAACTATCTCCCTTTCGGATTCTAGGGATGAAGAAGGTGGAGTGGAAGTTGGGCTAGCACTTGGAAGGGCTCAAATGAGCAAATTTTCTGCTATATTGGAAGAATATCTCAGAAATATTGCTATATAG 1434 0.4212 MAHPADLCQKLKVIEQCQVSPPPGSVPPTSLPLAFLDLPWVYCDTVQSIFFFEFPHSCNHFLQTVLPNLKHSLSLTLQQFFPFVGNLVIPPKPNFPHILYTSENSISFTIAESTADFPHLIADTARDVKDSHPFVPILPTPTTKEDGTWLLPLMAIQLTIFPEYGFSICISFRHVVADARAFLHFMKFWSYVCRTKHDVAATQDLLPLLNRDIIKDPKGLKFVFSEELWNSPIESIIKTPPKVVDKNDDKVRHAFVLRRDHVAKLKKWVSIECKSTYGLELESLHISTFVVTSALMWVCKVQSEEEVNAITIANNNNNDEIYSLKFLGDCRNRPEFSIPSTYFGNCIVIRIVSLNRSKLMGEKGIVEAAISIGRAVRDFQFDAMKDVENFMSLGRSGRKVKHSSTIAGSPKLGTYETDFGWGKPKKCEILHIEYSRTISLSDSRDEEGGVEVGLALGRAQMSKFSAILEEYLRNIAI* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0348 477 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 9 477 - -
Gso19g0348 477 PANTHER - 9 477 - -
Gso19g0348 477 Pfam Transferase family 25 466 - -
Gso19g0348 477 Gene3D - 10 238 IPR023213 -
Gso19g0348 477 Gene3D - 246 476 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0348 Gso-Chr19 5786000 5787718 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0348 48 470 Monolignol Biosynthesis Gene Families AT5G48930 22.955 7.45e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0348 - - gmx:100817697 947.577