Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0343 ATGGCTCACCCTGCTGATCTTTGTCAAAAGCTGAAAGTCATAGAGCAATGTCAAGTTTCTCCTCCACCAGGTTCGGTTCCTCCAACCTCTCTTCCACTAACCTTCCTTGACCTTCCTTGGGTTTACTGTAACACAGTGCAAAGCATTTTCTTCTTTGAGTTTCCTCACTCTTGTAACCACTTCTTGCAAACAGTGCTTCCAAATCTCAAACACTCTCTTTCCCTCACTCTCCAACAATTCTTCCCCTTCGTTGGAAACTTTGTGATCCCTCCTAAACCTAACTTCCCTCACATTCTCTACACCTCTGAAAACTCCATATCCTTCACCATTGCAGAATCCACTGCCGAGTTTCCACATCTCATAGCTGACACCGCTAGAGATGTTAAAGACTCGCACCCTTTTGTTCCTATCTTACCTACCCCAACTACCAAAGAAGATGGCACATGGTTGCTTCCTCTTATGGCCATTCAACTCACCATTTTCCCCGAATATGGCTTCAGCATTTGCATCAGTTTTAGACACGTTGTTGCTGACGCAAGAGCATTCTTACATTTCATGAAGTTCTGGTCCTATGTTTGTAGGACAAAACATGACGTGGCAGCTACTCAAGATTTGTTACCACTGCTCAACAGGGACATCATCAAAGACCCCAAAGGGCTTAAATTCGTTTTCTTGGAGGAACTATGGAATTCTCCTATAGAAAGCATAATAAAAACACCTCCAAAAGTTGTCGACAAAAACGATGACAAAGTCCGTCACGCGTTTGTGTTGAGGCGTGACCATGTTGCGAAGCTAAAGAAATGGGTGTCGATTGAATGTAAAAGTACTTATGGGTTAGAATTAGAGTCATTGCACATATCAACCTTTGTTGTGACAAGTGCTTTGATGTGGGTTTGCAAGGTTCAATCAGAAGAAGAGGCCAATGCTATCACTATTGCTAATAATAATAATAATGATGAAATCTACAGCTTTACGTTTCTGGGAGATTGCCGTAACCGTCCCGAATTTTCGATTCCTTCAACGTACTTTGGAAACTGCGTTGTCTTTCGCATGGTGTCACTAAACAGGAGCAAACTAATGGGAGAAAAAGGAATTGTTGAGGCAGCGATTAGTATTGGAAGGAAAGTTAGAGATTTTCAGTTTGATGCTATGAAAGACTTTGAAAATTTTATGTCTCTTTGTAGAGGTGGAAAAAAACTGAACCATGCGTCTACAATTGCAGGGTCGCCAAAGCTTGGAACATATGAGACTGATTTTGGGTGGGGAAAGCCCAAGAAGTGTGAAATACTTCACATAGAATATTCAAGAACTATCTCCCTTTCGGATTGTAGGGATGAAGAAGGTGGAGTGGAAGTTGAGCTAGCACTTGGAAGGGCTCAAATGAGCAAATTTTCTGCTATATTGGAAGAATATCTCAGAAATATTGCTATATAG 1434 0.4156 MAHPADLCQKLKVIEQCQVSPPPGSVPPTSLPLTFLDLPWVYCNTVQSIFFFEFPHSCNHFLQTVLPNLKHSLSLTLQQFFPFVGNFVIPPKPNFPHILYTSENSISFTIAESTAEFPHLIADTARDVKDSHPFVPILPTPTTKEDGTWLLPLMAIQLTIFPEYGFSICISFRHVVADARAFLHFMKFWSYVCRTKHDVAATQDLLPLLNRDIIKDPKGLKFVFLEELWNSPIESIIKTPPKVVDKNDDKVRHAFVLRRDHVAKLKKWVSIECKSTYGLELESLHISTFVVTSALMWVCKVQSEEEANAITIANNNNNDEIYSFTFLGDCRNRPEFSIPSTYFGNCVVFRMVSLNRSKLMGEKGIVEAAISIGRKVRDFQFDAMKDFENFMSLCRGGKKLNHASTIAGSPKLGTYETDFGWGKPKKCEILHIEYSRTISLSDCRDEEGGVEVELALGRAQMSKFSAILEEYLRNIAI* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0343 477 Gene3D - 10 238 IPR023213 -
Gso19g0343 477 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 9 477 - -
Gso19g0343 477 PANTHER - 9 477 - -
Gso19g0343 477 Pfam Transferase family 25 466 - -
Gso19g0343 477 Gene3D - 246 476 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0343 Gso-Chr19 5673206 5674855 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0343 48 470 Monolignol Biosynthesis Gene Families AT5G48930 22.955 2.00e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0343 - - gmx:100797080 946.036