Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0311 ATGGCTGGCATAGCATTCGGAAACTTCAATGATTCTGTTAGTTTTGCCTCCATCAAGGCCTACATTGCTGAGTTCATCTCAACCCTTCTCTTTGTTTTTGCCGGTGTTGGTTCAGCCATAGCCTATGCTAAGTTGACATCAGATGCAGCTCTTGATCCAACTGGGTTGGTAGCAGTTGCTATTTGCCATGGTTTTGCTCTCTTCGTTGCTGTTTCTGTTGGAGCCAACATTTCTGGTGGCCATGTGAACCCTGCTGTGACCTTTGGGTTGGCTCTTGGGGGCCACATCACCATCCTCACTGGTCTCTTCTACTGGATTGCACAGCTTCTCGGCTCCATAGTGGCATCCTTACTCCTCAAGTTTGTCACTGGCTATGATACTCCTATCCACAGTGTTGCTGCGGGAATTGGAGCTGGTGAAGGAGTAGTTACAGAGATCATAATCACATTTGGATTAGTGTACACAGTGTATGCCACAACAGCAGACCCTAAGAAGGGTTCGTTGGGCACAATTGCACCCATTGCCATTGGTTTCATTGTTGGCGCCAACATCTTAGCAGCAGGGCCATTCTCTGGCGGGTCCATGAACCCTGCACGCTCCTTTGGCCCTGCTGTTGTTAGTGGTGACTTTCATGACAACTGGATTTATTGGGTTGGCACTCTTATTGGTGGTGGTTTGGCTGGTCTTATCTATACCTATGCCTTCATAATGTGA 714 0.4804 MAGIAFGNFNDSVSFASIKAYIAEFISTLLFVFAGVGSAIAYAKLTSDAALDPTGLVAVAICHGFALFVAVSVGANISGGHVNPAVTFGLALGGHITILTGLFYWIAQLLGSIVASLLLKFVTGYDTPIHSVAAGIGAGEGVVTEIIITFGLVYTVYATTADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHDNWIYWVGTLIGGGLAGLIYTYAFIM* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0311 237 SUPERFAMILY Aquaporin-like 14 236 IPR023271 -
Gso19g0311 237 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso19g0311 237 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso19g0311 237 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso19g0311 237 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso19g0311 237 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso19g0311 237 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso19g0311 237 TIGRFAM MIP: MIP family channel proteins 23 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso19g0311 237 Gene3D Glycerol uptake facilitator protein. 2 237 IPR023271 -
Gso19g0311 237 Pfam Major intrinsic protein 14 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso19g0311 237 PANTHER AQUAPORIN-8 1 236 IPR034294 -
Gso19g0311 237 CDD MIP 19 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso19g0311 237 PANTHER MIP PROTEIN 1 236 - -
Gso19g0311 237 ProSitePatterns MIP family signature. 81 89 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0311 Gso-Chr19 4672525 4673671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0311 1 236 Major Intrinsic Protein MIP AT3G16240 79.747 3.01e-130 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0311 K09873 - gmx:100777964 446.817