Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0307 ATGACATTGCTTTTGGGCCCTCCATGTTCCGGAAAAACCACCCTCTTGTTGGTCTTGGGTGCAAAACTTGATCCAAAATTAAAGTTTTCTGGAAAGGTGACTTATAATGGTCGTGGGATGGATGAGTTTGTACCCCAAAAAACTGCTGCTTATGCCAATCAAAATGATCTTCATGTTGCAGAGTTGACAGTCAGAGAAACCTTGGCCTTCTCAGCAAGAGTCCAAGGAGTTGGAACTCGTTATGATTTGCTTGCAGAATTGTCCAGAAGAGAAAAAGAGACAAATATCAAGCCTAATCAAGATATTGATGTCTACATGAAGATTTTAGGACTGGAGGTCTGTGCTGATACTATTGTACGAAATGCAATGTTAAGGGGGATATCTGGTGGACAAAGGAAACGTGTTACAACAGGGGAGATGCTGGTTGGACCAACTAATGCTTTATTCATGGATGAAATATCTATTGGGGTCAGAAAGACTTTGAATTCAGAGTTATGGCATGCTTTTGCAGGGCTTCTTGTGTCATTACCCCAAGTTGGGAGTCTTGTGTTTTACTTCCCTCAGGGACATAGTGAGCAGGTGGCAGCTTCTACTAGAAGAACAACAACATCACAGATTCCAAACTACCCCAATCTTCCATATCAGTTGCTGTGTCAAGTTCAAAATGTCACACTTCATGTGAGTGTTGGGTGCTGGTTGACTTGA 705 0.4213 MTLLLGPPCSGKTTLLLVLGAKLDPKLKFSGKVTYNGRGMDEFVPQKTAAYANQNDLHVAELTVRETLAFSARVQGVGTRYDLLAELSRREKETNIKPNQDIDVYMKILGLEVCADTIVRNAMLRGISGGQRKRVTTGEMLVGPTNALFMDEISIGVRKTLNSELWHAFAGLLVSLPQVGSLVFYFPQGHSEQVAASTRRTTTSQIPNYPNLPYQLLCQVQNVTLHVSVGCWLT* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0307 234 Pfam ABC transporter 2 152 IPR003439 GO:0005524
Gso19g0307 234 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 158 - -
Gso19g0307 234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 170 IPR027417 -
Gso19g0307 234 Gene3D - 1 180 IPR027417 -
Gso19g0307 234 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0307 Gso-Chr19 4626731 4628929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0307 156 227 B3 DNA Binding Superfamily AT1G19850 75.342 3.79e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0307 K08711 - gmx:121174169 468.003