Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0297 ATGGCTTTCTTGATGGCAATTGTAGTAGTAGGTGTTGTCTTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAAGTAAGGTACAGGAAGAAAGGTTTGCCTCCTGGCACAATGGGTTGGCCACTTTTTGGGGAGACAACTGAGTTTCTTAAGCAGGGTCCAAACTTCATGAAAACCCAGAGAGCAAGGTATGGCAGTTTTTTCAAATCCCACATACTGGGTTGTCCTACCATTGTTTCCATGGATCCAGAGCTTAACAGATACATCCTAATGAATGAGGCAAAAGGGCTTGTTCCTGGTTACCCTCAATCCATGTTAGATATCTTAGGCAAATGCAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGAGCACTGCTTTCCATCATTAGCCCCACCTTGATCAGAGATCAGCTTTTGCCAAAAATTGATCAGTTCATGAGAGCCCACCTTAGCAACTGGGGTGACAAAGTCATCAACATTCAAGAGAAAACCAAAGAGATGGCCTTCTTATCATCTCTGAAGCAGATTGCTGGCATGGAATCTGGCTCATTATCTGACTCATTCATGGCAGAGTTCTTTAAGCTAGTTCTAGGAACCCTTTCTCTCCCTATTGATCTTCCTGGCACAAATTACCACAGTGGATTCCAGGCAAGGAAGACTATAGTGAACATTCTGAGTAAGCTCTTAGAGGAAAGAAGAGCATCACATGAAACCTACCATGACATGCTTGGTTGCTTGATGGGAAGAGATGAAAGTAGATACAAACTAAGTGATGAAGAAATCATTGATCTAGTGATTACAATCATGTATTCTGGCTATGAAACTGTTTCAACTACATCAATGATGGCAGTCAAGTACCTCCATGACCATCCCAAAGCTCTTGAGGAACTCAGAAAAGAACATTTGGCCATAAGAGAGAGGAAAAAGCCAGATGAACCACTTGACTGCAATGATCTCAAGTCAATGAGGTTCACTCGCGCGGTGATTTTTGAGACCTCTAGATTGGCCACAATAGTTAATGGGGTCCTAAGGAAAACCACTCAAGACATGGAACTAAACGGCTATTTGATCCCCAAAGGATGGAGAATATATGTGTATACAAGAGAGATCAATTATGACCCTTTTCTATATCCTGATCCACTAACATTCAACCCATGGAGATGGATGGACAAGAGTTTAGAATCAAAGAACTACTTCTTCATATTTGGAGGAGGCACCCGACAGTGTCCAGGAAAAGAGTTGGGAATAACCGAAATTTCCACTTTCTTACACTACTTTGTAACTAGATACAGGTGGGAAGAAGTAGGAGGAGATAAAGTAATGAAATTTCCTAGAGTTGAGGCACCTAATGGACTGCACATAAGGGTGACATCTTACTAA 1398 0.422 MAFLMAIVVVGVVLVLCFCSALLRWNEVRYRKKGLPPGTMGWPLFGETTEFLKQGPNFMKTQRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIRDQLLPKIDQFMRAHLSNWGDKVINIQEKTKEMAFLSSLKQIAGMESGSLSDSFMAEFFKLVLGTLSLPIDLPGTNYHSGFQARKTIVNILSKLLEERRASHETYHDMLGCLMGRDESRYKLSDEEIIDLVITIMYSGYETVSTTSMMAVKYLHDHPKALEELRKEHLAIRERKKPDEPLDCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYLIPKGWRIYVYTREINYDPFLYPDPLTFNPWRWMDKSLESKNYFFIFGGGTRQCPGKELGITEISTFLHYFVTRYRWEEVGGDKVMKFPRVEAPNGLHIRVTSY* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0297 465 Pfam Cytochrome P450 36 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0297 465 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0297 465 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0297 465 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0297 465 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0297 465 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0297 465 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0297 465 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0297 465 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0297 465 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0297 465 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0297 465 PANTHER CYTOCHROME P450 26 7 463 - -
Gso19g0297 465 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 463 - -
Gso19g0297 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
Gso19g0297 465 Gene3D Cytochrome P450 26 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0297 465 SUPERFAMILY Cytochrome P450 29 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0297 Gso-Chr19 4377964 4381869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0297 83 465 Cytochrome P450 AT5G38970 71.354 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0297 K09590 - gmx:100805958 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0351 13 15033326 15036861 Gso19g0297 19 4377964 4381869 GST
Gso19g0297 19 4377964 4381869 Gso18g2227 18 55219396 55223658 PCT
Gso19g0297 19 4377964 4381869 Gso8g2057 8 21911304 21915436 PCT
Gso18g2227 18 55219396 55223658 Gso19g0297 19 4377964 4381869 PCT
Gso8g2057 8 21911304 21915436 Gso19g0297 19 4377964 4381869 PCT