Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0292 ATGCAATGGCCTCCTCCGAGATTAACTGGGACAGGACTCTTCACGGGTGTTACAGCGGCACTCTACCCGGTTTCTGTTGTGAAAACTAGGCTGCAGGTTGCCTCAAAGGATACTTTGGAGAGAAGTGCGTTTTCTGTTGTGAAAGGTTTACTTAAAACGGATGGCATCCCTGGTTTGTATAAAGGGTTTGGTACAGTTATCATTGGAGCGATTCCTACCAGAATCATATTCCTCACTGCCTTAGAGACAACCAAGGTGGCTTCCTTCAGGGTGGTGGAGCCGTTTAGACTATCTGAAACTACTCAGGCTGCCATAGCAAATGGAATTGCAGGCATGGCATCATCATTTTTGTCACAAACTCTATTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATTATCAGGCCATGCCCAATATAGTGGGGGTTTGGATGTTGCTCGTAAGGTGTTAAGGTCTGATGGCATCAGGGGATTATATAGAGGATTTGGTCTATCTGTCATGACTTATGTACCATCTAATGTTGTATGGTGGGCAAGCTATGGTTCAAGTCAACGCTACTTATGGAGATTCTTGGGAGATAACAGTGAGGAATATACTCCTAGTCTACCAAAGATTATTTTTGCTCAGGCTACTGGAGGGATCATTGCTGGTGCTACTGCATCCTGCATTACAAACCCATTGGATACTATCAAGACACGATTACAGGTGCTGGGACTTGAAAAGAAAATCCCTGTAAAACAAGTTGTTAAAGATTTGATCGCTGAGGATGGTTGGAAAGGTGTATATAGAGGATTAGGTCCAAGACTTTTCAGCACGTCAGCATGGGGTACTTCAATGATATTGGCTTATGAATATCTGAAGCGCTTGTGTGCAAAAGATGGAGGAGGCAATTGA 906 0.4371 MQWPPPRLTGTGLFTGVTAALYPVSVVKTRLQVASKDTLERSAFSVVKGLLKTDGIPGLYKGFGTVIIGAIPTRIIFLTALETTKVASFRVVEPFRLSETTQAAIANGIAGMASSFLSQTLFVPIDVVSQKLMVQGLSGHAQYSGGLDVARKVLRSDGIRGLYRGFGLSVMTYVPSNVVWWASYGSSQRYLWRFLGDNSEEYTPSLPKIIFAQATGGIIAGATASCITNPLDTIKTRLQVLGLEKKIPVKQVVKDLIAEDGWKGVYRGLGPRLFSTSAWGTSMILAYEYLKRLCAKDGGGN* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0292 301 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 9 299 - -
Gso19g0292 301 SUPERFAMILY Mitochondrial carrier 10 290 IPR023395 -
Gso19g0292 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 87 IPR018108 -
Gso19g0292 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 293 IPR018108 -
Gso19g0292 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 190 IPR018108 -
Gso19g0292 301 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 9 299 - -
Gso19g0292 301 Gene3D Mitochondrial carrier domain 8 298 IPR023395 -
Gso19g0292 301 Pfam Mitochondrial carrier protein 211 296 IPR018108 -
Gso19g0292 301 Pfam Mitochondrial carrier protein 104 192 IPR018108 -
Gso19g0292 301 Pfam Mitochondrial carrier protein 12 85 IPR018108 -
Gso19g0292 301 PRINTS Mitochondrial carrier protein signature 19 33 IPR002067 GO:0055085
Gso19g0292 301 PRINTS Mitochondrial carrier protein signature 117 135 IPR002067 GO:0055085
Gso19g0292 301 PRINTS Mitochondrial carrier protein signature 163 181 IPR002067 GO:0055085
Gso19g0292 301 PRINTS Mitochondrial carrier protein signature 217 239 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0292 Gso-Chr19 4315222 4320745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0292 8 295 Chloroplast and Mitochondria Gene Families AT5G15640 73.973 4.74e-156 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0292 K15121 - gmx:100814858 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0356 13 15066574 15072457 Gso19g0292 19 4315222 4320745 GST
Gso19g0292 19 4315222 4320745 Gso18g2221 18 55182346 55186851 PCT
Gso19g0292 19 4315222 4320745 Gso8g2052 8 21816603 21821450 PCT
Gso18g2221 18 55182346 55186851 Gso19g0292 19 4315222 4320745 PCT
Gso8g2052 8 21816603 21821450 Gso19g0292 19 4315222 4320745 PCT