Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0290 ATGACGTTCCTCGGTATCACCTCCTTAACACTCTTCCTCCTTTCCCCCATCTTCACACACCTCAAAGCATACAACCCAGTGGACTGTTTCACCATCAGTTGTGGCACCACCACAGTTTCCCTGCCAACCGATCTGTATTACATGTCAGCAATTGACACTGTATTCACGCTTGTGGGACACGACATGCTGTTCAGCATTGAAAGCATTGCTGCACTGGAGACGGTGTATAGAATTCAAGTCCGAGGGCACGAAATCTCTCCACAAAGCGACACCGGTTTGTTCAGGAAATGGGCTGCTAACACGGATGGTAAGATGAACATAACCGTGAATCCTGATCATGTGGCGCCCAAGGAACTGTACAGAACAGCCCATAACATGGGCACAAACACCACTCTGAACATAATCAGCAACCTGACTTGGGAGTTTCCCGTTGATGCTGGCTTCACTTACGTGCTCAGGTTTCACTTTTGGGAGCTTGACCCCAATCTTGATATAGACGGTGACAGGGTGTTCTTCATTTACATAGCAAGCCACTTGGTTGATGATCGCGCTGATGTTATGAGATGGACACAGAAACAGAAAAGGTTTCTCCGCAATAATACTCAGAAAAAGGTGTACAAGGGCTACTTTGAAGGCGGTTTCACCCCAGTCACTATCAAACACCTCAAACTAGATTCACAGCAGGGTGCAAATGATATCATGAACAAGATTGAGATGCTCTCACAGCTCTGCCACCTTCATCTTGTGTTCCTCATCGGGTACTGCAATGAGAACTATGAAATGATCCTTGACTATGATTTCATGGCGTGTGACACCAATAACGCACATCTCTTGTGGAAGCAACGCTTGCAGATTTGCATCGGCATCACATGCAGGCTGCATTATCTCCACACAGGTGCGAAGCACACAATCATCCACCATGACTTGAAAACCACCAACATCCTGTTGGATGATAATGTCTCACCGAAAACCATGAGGTTCCTCAGTATCAACTCTGTAGCATTATTCCTCTTTCTCCTCTTCTCCACACACATCCAAGCGTACACTCCGGAAGACAACTTCAGCATCAGTTGCGGCACCACCGGGACATCCTTCGACGGTGAAAGGACATGGACAGGGGACATACACAAAAAGTACTTATCTGGTGGTCAAGATGACACCGTTTCAACTGAAGCAACAACACAATCTCCTTCTGTCAAACAAGTCCCCTACACCTCAGTACGCTTGTCTCGTTCTCAATTCAATTACTCCTTCCCCGTCACCGCTGGCCCCAAATTTGTTCGCCTCTTCTTCTATCCTGCCGACTACCCCTCCTTTCCTCGCACTGATGCCTCTTTCACCGTTCAATCCAACCAATTCACCCTCTTAAAAGGTTTTAACACCTCTCTAAATGCGGATGCAGGAAAAACGGAAACCATCTTCGGAGAATATGTGGTCAACGTCAACGATGGTGGGATTCTGCTCCTTAGCTTCACTCCGTCGAAACCATACTCCTACGCTTTCATCAATGGAATTGAGGTACTTTCCATGCCAACTGATCTTTATTACACATCAGCGACAGTGGATGCAGTTGGATTCAAGTTCGTGGGAAGAAACATGCAGTACACCCTCAGAACCAGCTTTGCCTTGCAAACAGAGTATAGAATCAAAGCCGGAGGGCAAGAAATCTCTGCACAAAACGACACCGGTTTGTTGAGGAAATGGGCTGGTGATGAACAAGATTATTTAATTAAGCAAAATCCAGAGAATAATGATCTACCAGCTAACACGGATGGAAAGATGAACATAACGGTGAATCCTGATCATGTGGCACCCAAGGAACTATACAGAACAGCGCGTAACATGGGCACAAACACCACTCTGAACATAATCAGCAACCTGACTTGGGAGTTCCCCGTTGACTCTGGTTTTACTTACATGATCAGGCTCCACTTTTGCGAGCTCGATCCAAATATTAGTGACATCAAGGACAGGGTGTTCTTAATTTACATAGCGAGCCAGTTGGCAGAAGACAATGCTGATGTTATGGAATGGACCCAGAAACAGAAAGGTCTCCCTGTGCATCAAAACTATGCGGTTTTGATTCCCAAGAATAATAATCAGAAAAAGGTTAATCTGTTGCTCCAAATGCATCCTCAAACTGATGATAAAACATTATATAGAGATGCGTTCTTGAACGGTCTCGAGATATTCAAAATCAGCGAAGCCAAGTCAAACAACCTTGCTGGACCTAATCCAGACCCAGTTCTGACTCCACACAACAACATACCCGCCCCAAAGGGAAACAGCAGCAGCGGGAGCCAAATGACCATAATTGGTGTCATTGCAGGGTTGGTATCTGGGGTTGTTTTGATATCCGTTGTCATTCTTTTTGTTGTAATTTTGTGGCGCAAGAGAACCACTGCTATGAAGACCAAGGATAGGTCAACCAACAAGCAGAACTACTCTCTGCCATCCGATCTCTGCCGCCGCTTCTCCCTCATCGAGATCAAAGCCGCCACCCAAAACTTTGACGAAGTCTTCATCATCGGCGTGGGAGGATTCGGCCATGTCTACAAGGGCTACATCGATGACAGTTTTACCCCCGTTGCCATCAAGCGCCTCAAACCGGGTTCACAGCAAGGGGCACGTGAGTTTTTGAATGAAATCGACATGCTTTCGCAACTCCGTCACCTCAATCTCGTCTCTCTCATCGGCTACTGCAACGATAATAAGGAAATGATCTTGGTCTATGATTTCGTGAGACGTGGCAATCTACGTGACCATCTCTACAACACCGATAAGCCCCCTCTCTCGTGGAAGCAACGGTTGCAGATTTGCATTGGGGCAGCGCTTGGGCTGGATTATCTTCACACAGGCGCGAAACACATGATCATCCACCGTGATGTAAAAACCACCAATATCTTATTGGATGATAAATGGGTGGTCAAGGTTTCAGACTTTGGGCTTTCCAGAATTGGACCCACGGGCGTGGACAAGTCTCATGTCAGCACTGTTGTGAGGGGAAGCTTTGGGTATTTAGACCCGGAATATTACAAACGCTACCGTTTGACAGAGAAGTCTGATGTGTACTCTTTTGGTGTAGTGTTGTTTGAGATACTGTGCGCTCGGCCACCTCTAATCCATAGTGCACAGATAGAACAGGTGTCACTTGCTAATTGGGTGAGGTGCTGTAACCAAAGTGGGACTATGTCTCGGATTGTGGACCCCACATTGAAGGGGAAGATCGCGCCTGAGTGCTTTAAGAAGTTTTGTGAGACTGGAATGAGTTGTTTGTTAGAGGATGGGAGGCAGAGGCCATCGATGAACGACGTCGTTTGGATGCTGGAGTTTGCACTCCAGCTACAAGAGAGTGCAGAGCAACGCGAAAATGATGGTATTGTTATTACTGAAGAAGTTAATGAGAAAAGAGAGGAAATTAGTGATGATACGTTTAATATTAACAAGAGTAGTAGTGCAGTGAGTGTGAATGTGAGTACAAGTAGTTCCAGCGAAGAGCATAGCTATGCAGGGATTGATATACTTGCTTGGTTGAGGGGCATGGGCAAAAACAAATTGTAA 3561 0.4619 MTFLGITSLTLFLLSPIFTHLKAYNPVDCFTISCGTTTVSLPTDLYYMSAIDTVFTLVGHDMLFSIESIAALETVYRIQVRGHEISPQSDTGLFRKWAANTDGKMNITVNPDHVAPKELYRTAHNMGTNTTLNIISNLTWEFPVDAGFTYVLRFHFWELDPNLDIDGDRVFFIYIASHLVDDRADVMRWTQKQKRFLRNNTQKKVYKGYFEGGFTPVTIKHLKLDSQQGANDIMNKIEMLSQLCHLHLVFLIGYCNENYEMILDYDFMACDTNNAHLLWKQRLQICIGITCRLHYLHTGAKHTIIHHDLKTTNILLDDNVSPKTMRFLSINSVALFLFLLFSTHIQAYTPEDNFSISCGTTGTSFDGERTWTGDIHKKYLSGGQDDTVSTEATTQSPSVKQVPYTSVRLSRSQFNYSFPVTAGPKFVRLFFYPADYPSFPRTDASFTVQSNQFTLLKGFNTSLNADAGKTETIFGEYVVNVNDGGILLLSFTPSKPYSYAFINGIEVLSMPTDLYYTSATVDAVGFKFVGRNMQYTLRTSFALQTEYRIKAGGQEISAQNDTGLLRKWAGDEQDYLIKQNPENNDLPANTDGKMNITVNPDHVAPKELYRTARNMGTNTTLNIISNLTWEFPVDSGFTYMIRLHFCELDPNISDIKDRVFLIYIASQLAEDNADVMEWTQKQKGLPVHQNYAVLIPKNNNQKKVNLLLQMHPQTDDKTLYRDAFLNGLEIFKISEAKSNNLAGPNPDPVLTPHNNIPAPKGNSSSGSQMTIIGVIAGLVSGVVLISVVILFVVILWRKRTTAMKTKDRSTNKQNYSLPSDLCRRFSLIEIKAATQNFDEVFIIGVGGFGHVYKGYIDDSFTPVAIKRLKPGSQQGAREFLNEIDMLSQLRHLNLVSLIGYCNDNKEMILVYDFVRRGNLRDHLYNTDKPPLSWKQRLQICIGAALGLDYLHTGAKHMIIHRDVKTTNILLDDKWVVKVSDFGLSRIGPTGVDKSHVSTVVRGSFGYLDPEYYKRYRLTEKSDVYSFGVVLFEILCARPPLIHSAQIEQVSLANWVRCCNQSGTMSRIVDPTLKGKIAPECFKKFCETGMSCLLEDGRQRPSMNDVVWMLEFALQLQESAEQRENDGIVITEEVNEKREEISDDTFNINKSSSAVSVNVSTSSSSEEHSYAGIDILAWLRGMGKNKL* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0290 1186 SUPERFAMILY Protein kinase-like (PK-like) 201 323 IPR011009 -
Gso19g0290 1186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 958 970 IPR008271 GO:0004672|GO:0006468
Gso19g0290 1186 Gene3D Phosphorylase Kinase; domain 1 797 913 - -
Gso19g0290 1186 SMART serkin_6 837 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0290 1186 Gene3D Transferase(Phosphotransferase) domain 1 249 357 - -
Gso19g0290 1186 ProSiteProfiles Protein kinase domain profile. 837 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0290 1186 PANTHER OS07G0166700 PROTEIN 204 323 IPR045272 GO:0004714|GO:0006468
Gso19g0290 1186 PANTHER OS07G0166700 PROTEIN 27 191 IPR045272 GO:0004714|GO:0006468
Gso19g0290 1186 PANTHER OS07G0166700 PROTEIN 337 1122 IPR045272 GO:0004714|GO:0006468
Gso19g0290 1186 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 337 1122 - -
Gso19g0290 1186 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 27 191 - -
Gso19g0290 1186 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 204 323 - -
Gso19g0290 1186 Pfam Protein kinase domain 204 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0290 1186 ProSitePatterns Protein kinases ATP-binding region signature. 843 866 IPR017441 GO:0005524
Gso19g0290 1186 Pfam Protein tyrosine and serine/threonine kinase 843 1107 IPR001245 GO:0004672|GO:0006468
Gso19g0290 1186 Gene3D - 70 242 - -
Gso19g0290 1186 Gene3D - 515 734 - -
Gso19g0290 1186 Gene3D - 358 513 - -
Gso19g0290 1186 CDD STKc_IRAK 843 1110 - -
Gso19g0290 1186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Gso19g0290 1186 SUPERFAMILY Protein kinase-like (PK-like) 810 1112 IPR011009 -
Gso19g0290 1186 Gene3D Transferase(Phosphotransferase) domain 1 914 1138 - -
Gso19g0290 1186 Pfam Malectin-like domain 67 188 IPR024788 -
Gso19g0290 1186 Pfam Malectin-like domain 356 733 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0290 Gso-Chr19 4284472 4292438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0290 193 327 Receptor kinase-like Gene Family AT3G51550 53.846 1.27e-35 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso19g0290 Malectin_like 2.3e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0290 - - gmx:100790235 2337.76