Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0288 ATGGAATTGACTTTGGTCAACCCGAGCTATGCCCTTGAGACGGAGCATAGAATCAATGTAGGAGGGAAAGAAATCTCAACACGAAACAATACTGGTTTGTTCAGGGTCTACACTGGTCACGATGAAAATTATTTAATGACACAAAATCTAAAGGATAATCTACCACTTGACAATAGTGGTAGGAACATAACAGTGAATCCATATTACATGGCACCCAAGGAACTGTACAGAACAACACGTGACATGAGCATAAACACCACTCTGAACAAAAGTCCCAAGTTAACTTTGGAGTTCCCCATTTTTGGCTGCTGCCACATGGTCAGGCTCCACTTTTGTGAACTTGGCCCAAATATTCATGATATCAATGAAAGGATTGATGTTCTCCATTTACATAGGAAATGTGAAGGACGTTATGAGATGGAGTCAAAAACCAAAATTAAAGGTCTCCCTTTGTACAAAGATTACATCATTTTAATTCATGGGAATGATGCTCAGAAAAAGTTTAATCTCTCACTCCAAATTTTCCCTTATGAAAGTGATAATCATAGGAAACACAATGACTTATTCTTGAACGACCTCGAGATCTTCAAAATCAGTAAGCCACAACACATCGTAACTGAGGGAAAGAGCAACAACATTGACAAAACTTACTCCCTCGTCAAGATCAAGGCCGCCACCAACAACTTTGTCGATGCCTTCATTGTTGGAATCGGGGGATTCGGCCATGTGTACAAGGGCTACATCAACAGCGGTTCCACCACAGTCGCCATCAAGCACCTCAAACCGGGTTCCAAGCAGGGTGTGCATGAGTTCATGAGCGAGATCGAGATGCTCTTGCAGCTCCACCACCTTCATCTCACCACTCTTCTTGGCTACTGCAATGATAACACAGAAATGATCATCGTCTACGACTTCATGGCACGTGGCAACCTCCGTGACCATCTCTACAACAGTGATAACCCCCCTCTCTCATGGAAGCAACGTTTGCAAATTTGTATTGGCATCGCTCGCGGGTTGCATTATCTTTACGCAGGCATGAAGCACATGATCATCCACCACGACGAGAAAACTACAAATATCTTGTTGGATGACAAGTGGGTGACCAAGGTTTCGGACTTTGGGTTTTCAAGCATTAGGCCTACGAGTATGTCAAAGGCCCATATAGTCATAGTTGTTAAGGGCAGTTTTGGGTATTTAGACCCAAAGTATTGTAACCGACAGCGTTTGACAGAGAAGTCTGACATGTACTCTTTTGGGGTTAACAAAAACTCACTAGGAATCAAATTCACCTTTTTCAAAAATATATTTTGTTCTTACCAGGTTCAATGTCTCTCGACCTGCTCTGATTTGTCTCTTTTTTTCTCTTTGTGCATATCGGCTCCTTTGCTGATGGTGGGGGTGAATACCTAA 1410 0.4248 MELTLVNPSYALETEHRINVGGKEISTRNNTGLFRVYTGHDENYLMTQNLKDNLPLDNSGRNITVNPYYMAPKELYRTTRDMSINTTLNKSPKLTLEFPIFGCCHMVRLHFCELGPNIHDINERIDVLHLHRKCEGRYEMESKTKIKGLPLYKDYIILIHGNDAQKKFNLSLQIFPYESDNHRKHNDLFLNDLEIFKISKPQHIVTEGKSNNIDKTYSLVKIKAATNNFVDAFIVGIGGFGHVYKGYINSGSTTVAIKHLKPGSKQGVHEFMSEIEMLLQLHHLHLTTLLGYCNDNTEMIIVYDFMARGNLRDHLYNSDNPPLSWKQRLQICIGIARGLHYLYAGMKHMIIHHDEKTTNILLDDKWVTKVSDFGFSSIRPTSMSKAHIVIVVKGSFGYLDPKYCNRQRLTEKSDMYSFGVNKNSLGIKFTFFKNIFCSYQVQCLSTCSDLSLFFSLCISAPLLMVGVNT* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0288 469 PANTHER OS07G0166700 PROTEIN 212 420 IPR045272 GO:0004714|GO:0006468
Gso19g0288 469 PANTHER OS07G0166700 PROTEIN 10 202 IPR045272 GO:0004714|GO:0006468
Gso19g0288 469 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 10 202 - -
Gso19g0288 469 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 212 420 - -
Gso19g0288 469 ProSiteProfiles Protein kinase domain profile. 229 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0288 469 Gene3D Transferase(Phosphotransferase) domain 1 307 421 - -
Gso19g0288 469 Gene3D - 11 235 - -
Gso19g0288 469 SUPERFAMILY Protein kinase-like (PK-like) 210 420 IPR011009 -
Gso19g0288 469 Gene3D Phosphorylase Kinase; domain 1 236 306 - -
Gso19g0288 469 ProSitePatterns Protein kinases ATP-binding region signature. 235 258 IPR017441 GO:0005524
Gso19g0288 469 Pfam Protein tyrosine and serine/threonine kinase 235 420 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0288 Gso-Chr19 4262696 4265361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0288 211 420 Receptor kinase-like Gene Family AT3G51550 62.381 2.77e-87 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso19g0288 PK_Tyr_Ser-Thr 2.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0288 - - gsj:114398489 961.059