Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0270 ATGTCTAAAAAGGTTTTGACATCAATGAAGGATGAAAATCCAGATTTGCAGAAGCAAATTGGGTGCATCAGTGGGTTTTTTCAGCTGTTTGACCGCCACAGTTTCCTCACGGGCCAAAGCAATAGCAGCCACAATCAGAACATACCAACTAATAAAGGTGGAATCAGCAACCGTATCAAAGAGGTGAATAATACAACTCATAAGGCAACGGCAAAAAATGTGAAGCTCACAAGAGAGAATCAACAATTCTCCACAGAATCATCAGGAACTTCAGTGACTTCATCATCTCGTTCATCTAGCATGTCGTCCCTCGAGTTTAATAGAACAATTCAGATAGAGCCACCATCAATCAGTCAAATGAAAATTCCAGAAAACACTAATTCAGAAGCAGCAATGAAGCAAGGCAACCAAGGCCACCAACCCCTTGATTTCTATGATATTGTCAAAGACTCAATGCATAGAGATGTTCATGGATTGTCAGTAAAAACTGTAGCTAAAGAGGAAAGGAAGGGTCGTATCTTGAAATACATGGACTCTCCCAGGCCTTTGGAGCCCTCAAAATCTGTCAATACAGGAGTTACGGTTGCTTGGGATTCACCAAGACTCTCCTACGATGGGAGGGACACACAAGATACATTCAAATCTGCTACAAAGCCCAAGGAACTCCCAAGGCTTTCCTTGGACAGCAGACAAGGATCTATCAAAAGTTTCAATGAAGGAACAAAATCTCGCATCCTTTTGAAGGGTTCACAGAAAGGGTATGGTAGTTCCAGAACAATGCAGCTGCAGGAACCAGAAACTTCTAGAAGACCGTCCGGCGTTGTAGCAAAGTTAATGGGACTAGAAGCCTTCCCAGACTGCACAGAAACTAGTGATACTCCATCACAGATGTCTAGCTGCACCACCAACAAAAATGAGACAATTGCAGGACCTAGCACAAATGATGAGTACAAGCAACACCAAAGTGCAGCATCATCCCAGGGAACAATCAAGGGGTCTAGCTTGCTTCAGTTTAGGAGGGATGCTTCAATCCTGAATGTGACACCGTATTCACGGTTTTCTCTAGAACCAATTCCATGGAGGCAACCTGAAGCAAGCCAAGGTTCTCAATTACAGGATTCCAAAAGAAGTGAATCTTCAGCAAAAGCATCAAACCTGACCATCTCTGTATATGGGGAAATTGAAAAGAGGATAGCAGATCTAGAGTTCAAAAATTCTGGAAAAGATCTCAGGGCCCTTAAACAGATTCTTGATGCAATGCAGAGATATAAAGAATCATTGGATATTCCAAGAGATCAGGTGTCTAATTCTCTATCTGACAATAGGAGTAGCAGCAGTCTCAGTGAAAGCTCAATAGTTAAAAGCCCAAGAATACGGCAGAAGGACCCAACATTCACCGTGGTTGAGATGTCAAATTCAACCCAGGGTAGTAAGTCACCAATTTTCATCATGAAACCAGCAAAAGCTGCAAGAAAAACCAATAGTCCTGCTTCCACAGAAATGTCATTTCAGGGTAAATCAAGCCTGGGCAAGTTTAGCTCTGCAAACTGCGCAAATGGAATAATGGGTGGCAAGCTTGACGGGCAAACAGCAAAGGGTATTGGCCCAGCAATCAGACATGCCAAGGATTCCATCAGCCAACCCTTGCACTCAGTGGATAAGAGTAATAAGATGAGAACTTCTAAATTGATGCAATCCTCAAAAGTTCGTCAAGTAATCAATGGAGAAAATGCCACCAACTCCAGCAATACAGCAGAGGCCAAGAGCCCAAGACTACAAAAGAAGTTTGGTTTGGAGAGGCGTTCCCGACCAACTAGCCCATCATCAGATTTGAGCAGTAACAGAAGACAACACAATAGGCAATCAGGGGAATTGTCTTCCTCAAGTACAACACCCAGACAAAAATTCAGTGAGATCAGCAATCAAAGGAGGGATTTTAGGCATGAAGTTGTCGTAGAAGTCATTCACACTGTTCATTCTGATAGGATCAATGGTAACTCCACTCAGCTAAAGGGCATGAACCAAAATAATGCAGCAGAAGAGTTGAGCAAGGAAAGCTTTATGGCTGAGAAAACAATTACAGCAGAACAACCAAGTCCTGTGTCTGTTCTTGATGCTTCTTTCTACAGAGAAGAACCACCTTCTCCAGTTAAAAAGAAATCAGACATGTCAAAAGATTTAGATGATGCTCTGAACACTTATGATAGTAGTGAGGAGAACTCAGAAAATCTTCAGCTTTCATCAAGCACTGCAAAAGCCAAGTTCGGCAGTGAAATCAGTGATACTGACTTGAGAACTCAAAAGTTGGTCAGAATTCTCCAACAAATTGACTACAATGATGAGAGATTCACCAATTTCAGAGATGATAAAGATCCTAACCATAAATATATATCAGAAATACTGTTAGCATCGGGGCTGCTCAGCAGTCAAAGCTCTAGCCAGGTTTTTCATTCATCAAGTTACCCGATAAACCCAAATTTGTTCCTTGCACTGGAGCAAATCAAGACAAACATGACGTGTTTCAATATTGAATGCAACGCCAAGAAGATTGCTGCACTGAATAGTCCTGAGCAAATACAAAGAAAGCTAATATTTGATGTTGTTAATGACATTCTAGCTCAGAAAATAATACTGGAAAGTTTTACTCTGTGGTGCCAACCAAATCAGCCAGCAGGTAGAAAACTAAGAGGACAGCTGCTTTTGGATGAGCTTTGCACAGAAATTGATAAGTTACAACATAAAAATACAAATGCCAACCTGAATGATGAGGATGAGAATTTGACAAGTCTCCTGTGGGAAGAGTTGATGCACTGTCCCACAATTTACACAAACAGTTACAGTGAAATACCAAATGTCGTGTTGGATATTGAACGGTTGATCTTCAAAGATTTGATAACTGAAGTTGTGAGAAGTGGACTAGCTAACCATTCTGGTAAGCATTGCAGACAACTGCTGTTTTCCAAGTAG 2967 0.4149 MSKKVLTSMKDENPDLQKQIGCISGFFQLFDRHSFLTGQSNSSHNQNIPTNKGGISNRIKEVNNTTHKATAKNVKLTRENQQFSTESSGTSVTSSSRSSSMSSLEFNRTIQIEPPSISQMKIPENTNSEAAMKQGNQGHQPLDFYDIVKDSMHRDVHGLSVKTVAKEERKGRILKYMDSPRPLEPSKSVNTGVTVAWDSPRLSYDGRDTQDTFKSATKPKELPRLSLDSRQGSIKSFNEGTKSRILLKGSQKGYGSSRTMQLQEPETSRRPSGVVAKLMGLEAFPDCTETSDTPSQMSSCTTNKNETIAGPSTNDEYKQHQSAASSQGTIKGSSLLQFRRDASILNVTPYSRFSLEPIPWRQPEASQGSQLQDSKRSESSAKASNLTISVYGEIEKRIADLEFKNSGKDLRALKQILDAMQRYKESLDIPRDQVSNSLSDNRSSSSLSESSIVKSPRIRQKDPTFTVVEMSNSTQGSKSPIFIMKPAKAARKTNSPASTEMSFQGKSSLGKFSSANCANGIMGGKLDGQTAKGIGPAIRHAKDSISQPLHSVDKSNKMRTSKLMQSSKVRQVINGENATNSSNTAEAKSPRLQKKFGLERRSRPTSPSSDLSSNRRQHNRQSGELSSSSTTPRQKFSEISNQRRDFRHEVVVEVIHTVHSDRINGNSTQLKGMNQNNAAEELSKESFMAEKTITAEQPSPVSVLDASFYREEPPSPVKKKSDMSKDLDDALNTYDSSEENSENLQLSSSTAKAKFGSEISDTDLRTQKLVRILQQIDYNDERFTNFRDDKDPNHKYISEILLASGLLSSQSSSQVFHSSSYPINPNLFLALEQIKTNMTCFNIECNAKKIAALNSPEQIQRKLIFDVVNDILAQKIILESFTLWCQPNQPAGRKLRGQLLLDELCTEIDKLQHKNTNANLNDEDENLTSLLWEELMHCPTIYTNSYSEIPNVVLDIERLIFKDLITEVVRSGLANHSGKHCRQLLFSK* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0270 988 MobiDBLite consensus disorder prediction 358 382 - -
Gso19g0270 988 MobiDBLite consensus disorder prediction 251 268 - -
Gso19g0270 988 MobiDBLite consensus disorder prediction 602 637 - -
Gso19g0270 988 MobiDBLite consensus disorder prediction 548 589 - -
Gso19g0270 988 MobiDBLite consensus disorder prediction 734 752 - -
Gso19g0270 988 MobiDBLite consensus disorder prediction 309 329 - -
Gso19g0270 988 MobiDBLite consensus disorder prediction 363 382 - -
Gso19g0270 988 MobiDBLite consensus disorder prediction 431 458 - -
Gso19g0270 988 MobiDBLite consensus disorder prediction 712 732 - -
Gso19g0270 988 MobiDBLite consensus disorder prediction 540 642 - -
Gso19g0270 988 MobiDBLite consensus disorder prediction 431 454 - -
Gso19g0270 988 PANTHER LONGIFOLIA PROTEIN 1 987 - -
Gso19g0270 988 Coils Coil 727 747 - -
Gso19g0270 988 PANTHER LONGIFOLIA PROTEIN 1 987 IPR033334 GO:0051513
Gso19g0270 988 MobiDBLite consensus disorder prediction 38 104 - -
Gso19g0270 988 MobiDBLite consensus disorder prediction 708 752 - -
Gso19g0270 988 MobiDBLite consensus disorder prediction 251 271 - -
Gso19g0270 988 Coils Coil 901 921 - -
Gso19g0270 988 Pfam Domain of unknown function (DUF4378) 794 967 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0270 Gso-Chr19 3854518 3859971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0270 132 987 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 31.356 1.89e-82 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0270 - - gmx:102662105 1835.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0371 13 15307231 15312777 Gso19g0270 19 3854518 3859971 GST