Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0269 ATGATCAACAGCACGAAAGAAACTGATTTTCCACTAAAACAAGAAGGTCTTTCTTCAAGTGATCATGAGAAGGCAAAGGCTCCATCGAGCTCATCATCATCACAATGGCTAAAACTGAAGGATCCAAGGATTGTTCGAGTATCAAGAGCCTTTGGAGGAAAAGACAGGCATAGCAAGGTATGCACAATAAGAGGACTAAGAGATAGAAGAGTGAGGCTTTCAGTCCCTACAGCAATTCACCTCTATGATCTCCAAGATAGGCTTGGACTCAACCAACCAAGCAAGGTTGTTGATTGGTTGCTCAATGCAGCAAAACATGAAATTGATGAATTGCCACCACTTCCAATTCCTCCAGGTAACTTCACCCTTGGTTATCCCTCTCTTGTTTCTTGTAATGAAGTTAGCACCTCTCGTGAAGGTTCAGGCCAAAACACTTTATTATGGAAACCAAAGCCAGGAGAAATAATGGTTAGTGATCATGATAAGGCAAATTGGATGAATAGAAGAGAAGGAGATGATGATGATGATAATAATCATAATAATAGTAATGGTGATAAACAAGGAAGCAATAATAATTGTCATGGTGGTGCACTTGTTTTGCCAAATAATCTCTTGCCAACAAGACCAAACCATCCTTCTTTTTTGGGTTTGATGAACACTATGCCATCACTTGGTTACCAATGGGAACCTAATTCTTCAGCTGCTGATGTTAATGTTCAATGGCAAAACCATGGATTTTTTAACCAAACAGATGTACACAGCATCGATGTGGTTCCATTTCCGTCAACACTGGCTCTATCAACTGGGAATAGTACTAGTACTACTACTACTTCTCAGATTTTGGTGTGTCCTCCTCCTCCGGGAGCAACAACACAGCCATATTTTCCTTCTTCACATTTTGCAACAATGGAGATGAATGCAAGGCAAATCAACCACTATCAGATGCTGAGTTCAAGTTCTCATCAAAATCTCTTGGCAAATTCTCTCAATCATCCATCATCACAGCAACTCATGAGCCAATCCGGGAAAGCACCATTCAGCTTGCGAATTAGGCCTAAACTTTTCCATTCTCCTAATAGCAGTGAAAGCCATTCCCAAAAAGATCAGGATTTCCCTTCCAAGTGA 1125 0.4062 MINSTKETDFPLKQEGLSSSDHEKAKAPSSSSSSQWLKLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTLGYPSLVSCNEVSTSREGSGQNTLLWKPKPGEIMVSDHDKANWMNRREGDDDDDNNHNNSNGDKQGSNNNCHGGALVLPNNLLPTRPNHPSFLGLMNTMPSLGYQWEPNSSAADVNVQWQNHGFFNQTDVHSIDVVPFPSTLALSTGNSTSTTTTSQILVCPPPPGATTQPYFPSSHFATMEMNARQINHYQMLSSSSHQNLLANSLNHPSSQQLMSQSGKAPFSLRIRPKLFHSPNSSESHSQKDQDFPSK* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0269 374 MobiDBLite consensus disorder prediction 1 35 - -
Gso19g0269 374 MobiDBLite consensus disorder prediction 1 15 - -
Gso19g0269 374 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 370 IPR005333 GO:0003700
Gso19g0269 374 MobiDBLite consensus disorder prediction 182 197 - -
Gso19g0269 374 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 370 - -
Gso19g0269 374 ProSiteProfiles TCP domain profile. 53 111 IPR017887 -
Gso19g0269 374 MobiDBLite consensus disorder prediction 165 197 - -
Gso19g0269 374 MobiDBLite consensus disorder prediction 165 181 - -
Gso19g0269 374 MobiDBLite consensus disorder prediction 348 374 - -
Gso19g0269 374 Pfam TCP family transcription factor 53 183 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0269 Gso-Chr19 3844118 3846983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0269 36 123 TCP Transcription Factor Family AT3G02150 84.091 9.41e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso19g0269 TCP 2.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0269 - - gmx:100803100 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0373 13 15326764 15329444 Gso19g0269 19 3844118 3846983 GST