Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0265 ATGTTTTCTTCTTCTTTTTCTCACAGCAGTTCAGCGATCAAATGGAATTCCCTCACACAATTTCTCTTCCTTGTTTTCTTCCTCTTCTCCGCGTCGCGAAACGACGCCGTTTCGCCCTTTTCGGACAAATCCGCGCTCCTCCGCCTTAAAGCCTCGTTCTCCAACCCCGCCGGCGTTCTCTCCACGTGGACCTCCGCCACCGCCACCTCTGACTCCGGCCACTGCTCCTTCTCCGGCGTCCTCTGCGACGCGAACTCCCGAGTCGTCGCCGTCAACGTCACCGGCGCCGGCGGCAACAACCGAACATCTCCCCCGTGCTCAAATTTCTCCCAATTCCCTCTCTACGGCTTCGGAATTCGGCGAACCTGTTCCGGTAGCAAAGGTTCTCTCTTCGGAAACGCTTCTTCTCTGAGCTTCATCGCCGAGCTCACGGAGCTTAGGGTTTTGTCGCTCCCCTTCAATGCGTTGGAGGGTGAAATCCCCGAAGCGATTTGGGGCATGGAGAACCTCGAGGTTCTCGACTTAGAAGGGAATTTGATAAGTGGCTGTCTTCCTTTCAGAATCAATGGCTTGAAGAATTTAAGGGTTTTGAATCTCGCGTTTAATAGGATTGTTGGGGATATACCTAGTTCAATTGGGTCTCTTGAGAGATTGGAGGTTTTGAATTTGGCTGGTAATGAATTGAATGGTTCTGTTCCCGGTTTTGTAGGGAGGCTTAGAGGGGTGTATCTGTCTTTTAATCAGTTAAGTGGGATTATTCCAAGAGAGATTGGGGAGAATTGTGGGAACCTTGAGCATTTGGATTTGTCTGCGAATTCGATTGTTCGAGCGATTCCAAGGAGTTTGGGGAATTGTGGGAGGTTGAGGACGCTTTTGTTGTATTCCAATTTGTTGAAAGAGGGTATTCCGGGTGAGCTTGGGAGACTTAAGAGCCTTGAGGTGTTGGATGTTTCCAGGAACACTCTCAGCGGCTCTGTGCCGCGGGAGCTTGGGAATTGCTTGGAGTTGAGAGTGCTTGTGCTGTCGAATCTATTCGATCCACGTGGGGATGTTGATGCTGGTGATTTGGAGAAATTGGGGTCTGTGAATGATCAGTTGAATTATTTTGAAGGGGCAATGCCTGTGGAGGTTTTGTCGCTTCCCAAGTTGAGGATATTGTGGGCTCCCATGGTGAATTTGGAAGGTGGTTTACAGGGAAGTTGGGGCGGTTGTGAGAGCTTGGAGATGGTGAATTTGGCTCAGAATTTTTTCAGTGGGGAGTTTCCAAACCAGCTTGGTGTTTGCAAGAAGCTGCATTTTGTTGATTTAAGCTCTAACAATCTTACAGGGGAGCTTTCTGAGGAACTCCGAGTTCCCTGTATGAGTGTGTTTGATGTTAGTGGGAACATGTTATCTGGTTCAGTTCCTGATTTCTCCAACAATGTTTGTCCCCCTGTTCCTTCCTGGAATGGAAATCTGTTTGCAGATGGCAATGCTTCCCCGCGGTATGCATCCTTTTTTATGTCAAAGGTTCGTGAGAGATCACTTTTCACGTCAATGGGGGGAGTTGGCACTTCTGTTGTTCACAACTTTGGGCAAAACAGCTTTACTGACATTCACTCGTTGCCAGTAGCACATGACAGGCTGGGAAAGAAGTGCGGTTACACATTTCTTGTTGGTGAAAATAATCTTACAGGACCTTTTCCTACTTTTTTATTTGAGAAATGTGATGAATTAGATGCATTGCTTTTAAATGTCAGTTATAATAGGATATCTGGTCAGATTCCTTCCAATTTTGGTGGAATATGCAGATCATTGAAATTTTTGGATGCGTCTGGAAATGAACTTGCAGGAACGATTCCCCTTGATGTAGGGAATTTGGTCTCTCTTGTATTTCTGAACCTCAGTAGGAATCAGTTACAAGGCCAGATTCCCACCAACCTTGGCCAGATGAAGAATCTGAAGTTTCTTTCTTTGGCTGGTAATAAGTTGAATGGCTCAATTCCTATCAGCCTGGGGCAGTTGTACTCTTTAGAAGTCTTGGACCTTTCTTCAAACTCTCTTACTGGTGAGATTCCAAAGGCTATTGAAAACATGAGAAATCTGACAGATGTTTTGCTCAATAACAACAATCTTTCTGGTCACATTCCTAATGGTTTGGCACATGTCACTACACTCTCCGCATTCAATGTGTCTTTCAACAACTTATCTGGATCCTTGCCTTCAAATAGTGGCTTGATTAAATGCAGAAGTGCTGTTGGGAATCCGTTTCTAAGTCCCTGCCGTGGAGTTTCGCTGACCGTGCCATCAGGGCAACTAGGGCCACTTGATGCAACAGCACCAGCTACTACAGGCAAGAAGAGTGGGAATGGCTTCAGTTCTATTGAAATAGCATCTATAACTTCTGCTTCAGCCATTGTTTTGGTCCTTATAGCCCTGATTGTTCTATTCTTTTACACTCGGAAGTGGAAGCCAAGGTCCAGGGTTATTAGTTCTATAAGAAAAGAAGTTACAGTGTTCACTGATATTGGGTTCCCATTGACGTTTGAAACTGTAGTCCAAGCCACAGGAAACTTCAATGCAGGTAACTGTATTGGGAATGGAGGTTTTGGCACAACATACAAGGCAGAGATATCACCAGGAATCCTGGTGGCAGTCAAACGACTTGCAGTTGGACGTTTCCAAGGTGTCCAACAATTCCATGCTGAGATCAAGACCCTTGGGAGGCTTCATCATCCAAATCTTGTCACTCTGATTGGTTATCATGCTTGTGAAACAGAGATGTTTCTCATATACAATTTTTTATCAGGTGGTAATCTCGAAAAGTTTATCCAGGAGAGGTCCACAAGGGATGTGGAGTGGAAAATTCTTCACAAGATCGCATTAGACATAGCCCGTGCACTCGCCTATCTGCATGATACGTGTGTTCCCCGCGTTCTTCACCGCGATGTCAAGCCCAGCAACATCTTGTTGGATGATGATTTCAATGCTTATCTATCTGACTTTGGGTTGGCTAGACTTCTGGGGACTTCAGAGACACATGCTACCACTGGTGTAGCCGGAACATTCGGCTATGTTGCACCTGAATATGCCATGACGTGCCGTGTTTCTGATAAGGCTGATGTGTACAGCTACGGTGTGGTGCTTCTGGAGTTGCTCTCAGACAAGAAGGCATTGGATCCTTCGTTTTCTTCTTATAGAAATGGTTTCAACATAGTGGCATGGGCATGCATGCTACTGAAGCAAGGAAGGGCAAAGGAGTTCTTCACTGCTGGGTTGTGGGAAGCAGGACCTGGAGATGATTTGGTAGAAGTGCTTCACTTAGCAGTTGTGTGTACTGTTGACATTCTCTCTACCAGACCTACAATGAAACAGGTTGTAAGAAGGCTTAAGCAACTTCAACCCCTAACATGCTAG 3396 0.4597 MFSSSFSHSSSAIKWNSLTQFLFLVFFLFSASRNDAVSPFSDKSALLRLKASFSNPAGVLSTWTSATATSDSGHCSFSGVLCDANSRVVAVNVTGAGGNNRTSPPCSNFSQFPLYGFGIRRTCSGSKGSLFGNASSLSFIAELTELRVLSLPFNALEGEIPEAIWGMENLEVLDLEGNLISGCLPFRINGLKNLRVLNLAFNRIVGDIPSSIGSLERLEVLNLAGNELNGSVPGFVGRLRGVYLSFNQLSGIIPREIGENCGNLEHLDLSANSIVRAIPRSLGNCGRLRTLLLYSNLLKEGIPGELGRLKSLEVLDVSRNTLSGSVPRELGNCLELRVLVLSNLFDPRGDVDAGDLEKLGSVNDQLNYFEGAMPVEVLSLPKLRILWAPMVNLEGGLQGSWGGCESLEMVNLAQNFFSGEFPNQLGVCKKLHFVDLSSNNLTGELSEELRVPCMSVFDVSGNMLSGSVPDFSNNVCPPVPSWNGNLFADGNASPRYASFFMSKVRERSLFTSMGGVGTSVVHNFGQNSFTDIHSLPVAHDRLGKKCGYTFLVGENNLTGPFPTFLFEKCDELDALLLNVSYNRISGQIPSNFGGICRSLKFLDASGNELAGTIPLDVGNLVSLVFLNLSRNQLQGQIPTNLGQMKNLKFLSLAGNKLNGSIPISLGQLYSLEVLDLSSNSLTGEIPKAIENMRNLTDVLLNNNNLSGHIPNGLAHVTTLSAFNVSFNNLSGSLPSNSGLIKCRSAVGNPFLSPCRGVSLTVPSGQLGPLDATAPATTGKKSGNGFSSIEIASITSASAIVLVLIALIVLFFYTRKWKPRSRVISSIRKEVTVFTDIGFPLTFETVVQATGNFNAGNCIGNGGFGTTYKAEISPGILVAVKRLAVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHACETEMFLIYNFLSGGNLEKFIQERSTRDVEWKILHKIALDIARALAYLHDTCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYRNGFNIVAWACMLLKQGRAKEFFTAGLWEAGPGDDLVEVLHLAVVCTVDILSTRPTMKQVVRRLKQLQPLTC* 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0265 1131 SUPERFAMILY L domain-like 39 344 - -
Gso19g0265 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 972 984 IPR008271 GO:0004672|GO:0006468
Gso19g0265 1131 Gene3D Ribonuclease Inhibitor 548 636 IPR032675 -
Gso19g0265 1131 Gene3D Ribonuclease Inhibitor 40 236 IPR032675 -
Gso19g0265 1131 Pfam Protein kinase domain 855 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0265 1131 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 17 1128 - -
Gso19g0265 1131 Gene3D Transferase(Phosphotransferase) domain 1 928 1129 - -
Gso19g0265 1131 SMART serkin_6 852 1129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0265 1131 SMART LRR_typ_2 261 285 IPR003591 -
Gso19g0265 1131 SMART LRR_typ_2 620 644 IPR003591 -
Gso19g0265 1131 SMART LRR_typ_2 668 691 IPR003591 -
Gso19g0265 1131 SMART LRR_typ_2 236 260 IPR003591 -
Gso19g0265 1131 SMART LRR_typ_2 143 167 IPR003591 -
Gso19g0265 1131 SMART LRR_typ_2 309 333 IPR003591 -
Gso19g0265 1131 SMART LRR_typ_2 692 715 IPR003591 -
Gso19g0265 1131 SMART LRR_typ_2 191 215 IPR003591 -
Gso19g0265 1131 CDD STKc_IRAK 858 1126 - -
Gso19g0265 1131 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 17 1128 - -
Gso19g0265 1131 Gene3D Ribonuclease Inhibitor 637 755 IPR032675 -
Gso19g0265 1131 SUPERFAMILY L domain-like 288 471 - -
Gso19g0265 1131 Pfam Leucine rich repeat N-terminal domain 41 83 IPR013210 -
Gso19g0265 1131 SUPERFAMILY L domain-like 553 736 - -
Gso19g0265 1131 SUPERFAMILY Protein kinase-like (PK-like) 836 1123 IPR011009 -
Gso19g0265 1131 Gene3D Phosphorylase Kinase; domain 1 815 927 - -
Gso19g0265 1131 ProSitePatterns Protein kinases ATP-binding region signature. 858 880 IPR017441 GO:0005524
Gso19g0265 1131 Pfam Leucine Rich Repeat 263 285 IPR001611 GO:0005515
Gso19g0265 1131 Pfam Leucine Rich Repeat 670 692 IPR001611 GO:0005515
Gso19g0265 1131 ProSiteProfiles Protein kinase domain profile. 852 1130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0265 1131 Gene3D Ribonuclease Inhibitor 237 346 IPR032675 -
Gso19g0265 1131 Gene3D Ribonuclease Inhibitor 352 535 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0265 Gso-Chr19 3766421 3770440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0265 41 1131 Receptor kinase-like Gene Family AT3G02130 61.998 0.0 1297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Gso19g0265 Pkinase 4.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0265 - - gmx:100802574 2178.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0375 13 15372657 15376627 Gso19g0265 19 3766421 3770440 GST