Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0234 ATGGAGAATTGGAGGGGTGCTCGGATGATGGTGGTGGCGAGTGCGGTGGCGATGGGGTGGCTTTCGGTGGTGGCCATGGGAAGTCCGGTGCTTCACAAGGTGGGAGGGTCCAAAGGTTGGATCAATCAAGACGTGAACTACACTGAATGGTCTGCTCAAGAGCATATCTATGTTGGGGATTGGCTCATCTTCAAGTTCGACAAACGATACTTCAACGTTCTGGAGGTGAACAAGACAAGCTACGAGAACTGCATAGACAGAGACTTCATAAAAAACATCACTCGAGGTGGTCGTGATGTGGTGCAAATGACGGAGGCAAGGACCTACTACTACCTCTCCGGTGGAGGTTACTGTTTTCATGGCATGAGAGTGGCCGTGCAAGTTCAACAAGAGGACCAAGATCCGGCACTCGCAATGGCGGCGCCACCGGCTCCGTCCCCCGTCGCGTATGGTTCTTCTTCTCCCTTGCCCTCGGTGTGCACATGCATTTGGATCATCATTGTTGCTAATGTTGTGGTTTTTGTGAATTAG 531 0.5179 MENWRGARMMVVASAVAMGWLSVVAMGSPVLHKVGGSKGWINQDVNYTEWSAQEHIYVGDWLIFKFDKRYFNVLEVNKTSYENCIDRDFIKNITRGGRDVVQMTEARTYYYLSGGGYCFHGMRVAVQVQQEDQDPALAMAAPPAPSPVAYGSSSPLPSVCTCIWIIIVANVVVFVN* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0234 176 SUPERFAMILY Cupredoxins 31 129 IPR008972 -
Gso19g0234 176 PANTHER BLUE COPPER PROTEIN 9 174 IPR039391 GO:0009055
Gso19g0234 176 Gene3D - 30 134 IPR008972 -
Gso19g0234 176 ProSiteProfiles Phytocyanin domain profile. 30 130 IPR003245 GO:0009055
Gso19g0234 176 PANTHER EARLY NODULIN-LIKE PROTEIN 20 9 174 - -
Gso19g0234 176 Pfam Plastocyanin-like domain 42 122 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0234 Gso-Chr19 3345936 3348521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0234 31 154 Phytocyanin Superfamily AT2G27035 43.548 7.46e-38 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0234 - - gmx:100795494 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0234 19 3345936 3348521 Gso19g0234 19 3345936 3348521 ECH
Gso13g0402 13 15683700 15686376 Gso19g0234 19 3345936 3348521 GST