Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0208 ATGGAAACAGGGAAGCATGATGAGACTGAAGATGAGAACAAACTGGATGGGGAAAAGCTGATTGAGGAGAGATCCAAAGAGGTGGAAACCCCTAAAGATGATCCGAAAGGAAATCAAGAGGCGAGAAGATTATGGGTTGACGTGATAAGTGAGAATCGAAATCCAACAAAAGGAAGGATGATGTCTTATGTGGCACCGAAAATGGTAGAGGGACAAATTGAAATCGAGATTGAGGATGAGGACATCGAATCTGAAATTAGATATTGGGAAAATGCCCTAATCCTATATGTGCTGGGGGGTGACCTCAATATGAATACGATTAAGAATTTCATGGAGAGAAACTGGAATTTTGTGCAGCTGCCAAACTTGTATTATCACGATGATGGGTACTTCCTGCTAAGATTCAAATCACATGACGATATGGAAGTGGTGGTGATGAAGGGTCCCTATACAATAAGAAGCATGCCGGTGGTACTCAAAGAGTGGAGAACTGATTTTAGTCTGAAGCAGGACATGCTACGAACCATACCGATATGGATAAAACTTCCCAAGCTCCCGTTGTATCTTTGGGGCGAACGAAGCCTTAACAAAATTGGCAGTGCCATTGGTACACCCATGGTTACTGATGAATGCACTACCCACAAACTCAGAGTTTCCTATGCCAGGATGTTAGTGGAGGTCGACATTACTAGAAAATTGGTGGAAGAAATTGCTATCAAGGATAAAGATGGAAGAAATGTTACAAATGATTTGGTTAGACACCAACCAGTTACCCAAAGATCCTTATCCACCAAAAGGTCAAAAAGATCCTCAGCCACCAACTTAAGCCAGGAAATAATCCAAGCTTCTTCCCTTCGAAGATTCACCTTTAATGATCTTAAGTTGGCAACAAGAAATTTTGAGTCTAAGAATCTTCTTGGTGAGGGGGGTTTTGGAACTGTGTTGAAAGGTTGGGTCAATGAGCATGAGAACTTTGCAGCACGACCTGGAACAGGGACTCCAGTTGCAGTGAAGACTCTCAACCCAAATGGATTTCAAGGTCATAAAGAATGGCTTGCTGAAATTAATTATCTTAGTGAGCTCCATCATCCAAATCTGGTTAGATTGGTTGGCTATTGCATCGAAGATGCTAAAAGGTTACTAGTATATGAGTATATGTCTCAAGGAAGCTTAGACAACCATTTGTTCAAGACGGCAACTAAGCACCTTACATGGCCTATCAGAATGAAAATTGCAATTGGTGCTGCTAATGCCCTTGCATTTTTGCATGAGGAAGCTTCAAGGCCAGTAATATTCCGAGATTTCAAGACATCTAATGTCCTATTGGATGAGGACTACAATGCAAAACTTTCTGACTTTGGGCTTGCCCAAGATGCTCCAGTGGGAGATAAAACTCATGTTTCCACTGAAGTAATGGGAACACAAGGCTATGCAGCCCCTGAGTATGTGATGACGGGACACCTTACTTCCAAGAGTGATGTCTATAGCTTTGGGGTGGTTCTACTTGAAATGCTGACAGGAAGAAGAGCCGTGGATCAAAGAGTTCCTAGGAAGGAGCAAAACTTGGTGGAATGGTTGCGTCCTCGTCTTAGGGAGAAAGATAATTTTCACTATCTAATGGATCCAAGACTTGGAGGTCAATACCCAATGAAAAGTGCTCGTAGGGCATTGTGGTTGGCCACTCACTGTATTCGTCATAACCCTAAATCAAGACCCCTTATGAGTGAAGTGGTTCGTGAGTTGAAATCTTTGCCTCTTTTTCGTGATGATGATGACATGGTTTCTCAACCTGGTCCCACAACTTCATCAGTTTCCTCAGTCTCAATTCCCTCAACCTCACTTCAAAGATTGGATGTAGGCCCCTCCAACCATGGTGGTGCGAACAAGTATGGCCTCAGAACAGGTCAATCACCATACGTTCGAAGGCACTTTCAAGCCTATCCTCTACCTCTTCCAAATCCTGGTGTTGGATCTTCATCCAATCCTACTGTTGCATCTTTGTCCAATGTAGTAGTTAACCCTAGTGTTCGACAACCGATCTAA 2043 0.4288 METGKHDETEDENKLDGEKLIEERSKEVETPKDDPKGNQEARRLWVDVISENRNPTKGRMMSYVAPKMVEGQIEIEIEDEDIESEIRYWENALILYVLGGDLNMNTIKNFMERNWNFVQLPNLYYHDDGYFLLRFKSHDDMEVVVMKGPYTIRSMPVVLKEWRTDFSLKQDMLRTIPIWIKLPKLPLYLWGERSLNKIGSAIGTPMVTDECTTHKLRVSYARMLVEVDITRKLVEEIAIKDKDGRNVTNDLVRHQPVTQRSLSTKRSKRSSATNLSQEIIQASSLRRFTFNDLKLATRNFESKNLLGEGGFGTVLKGWVNEHENFAARPGTGTPVAVKTLNPNGFQGHKEWLAEINYLSELHHPNLVRLVGYCIEDAKRLLVYEYMSQGSLDNHLFKTATKHLTWPIRMKIAIGAANALAFLHEEASRPVIFRDFKTSNVLLDEDYNAKLSDFGLAQDAPVGDKTHVSTEVMGTQGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAVDQRVPRKEQNLVEWLRPRLREKDNFHYLMDPRLGGQYPMKSARRALWLATHCIRHNPKSRPLMSEVVRELKSLPLFRDDDDMVSQPGPTTSSVSSVSIPSTSLQRLDVGPSNHGGANKYGLRTGQSPYVRRHFQAYPLPLPNPGVGSSSNPTVASLSNVVVNPSVRQPI* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0208 680 Gene3D Phosphorylase Kinase; domain 1 270 385 - -
Gso19g0208 680 Pfam Domain of unknown function (DUF4283) 82 225 IPR025558 -
Gso19g0208 680 MobiDBLite consensus disorder prediction 589 634 - -
Gso19g0208 680 ProSitePatterns Protein kinases ATP-binding region signature. 306 338 IPR017441 GO:0005524
Gso19g0208 680 PANTHER TYROSINE KINASE FAMILY PROTEIN 251 608 - -
Gso19g0208 680 MobiDBLite consensus disorder prediction 1 41 - -
Gso19g0208 680 MobiDBLite consensus disorder prediction 595 619 - -
Gso19g0208 680 SUPERFAMILY Protein kinase-like (PK-like) 273 581 IPR011009 -
Gso19g0208 680 CDD STKc_IRAK 306 584 - -
Gso19g0208 680 Pfam Protein tyrosine and serine/threonine kinase 302 581 IPR001245 GO:0004672|GO:0006468
Gso19g0208 680 Gene3D Transferase(Phosphotransferase) domain 1 386 594 - -
Gso19g0208 680 PANTHER OS01G0588500 PROTEIN-RELATED 251 608 - -
Gso19g0208 680 ProSiteProfiles Protein kinase domain profile. 300 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0208 Gso-Chr19 2706987 2717293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0208 277 608 Glycoside Hydrolase AT3G07070 48.824 3.78e-102 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso19g0208 PK_Tyr_Ser-Thr 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0208 - - gsj:114400414 1354.35