Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0185 ATGTTTATTCCCTTTAAATCATCAGGAAGGGAAGTTATAAAAGATAATGTTAGACAACAACCGGTTACTCCAAGATCCTCATCCACCATAAGATTAAGAAGTCGTGGAAGATCATATACTCCCAACCAGGAATTAATTGCAGCTTCTTCCCTTCTTCGAAGGTTCTCCTTTAATGACCTTAAGTTGGCAACGAGTAACTTTAAATATGACAATTTACTTGGTGAAGGGGGGTTTGGATCAGTGTTCAAAGGTTGGGTCGATCAAGATGAGAACTATGCAACAAAGCCTGGAATAGGGATTCCAATTGCAGTGAAGACTCTCAACCTAAATGGATTACAGGGTCATAAGGAATGGCTTGCTGAAATTAGTTATCTAGGTGAACTTCATCATCCAAATTTGGTTAGATTGGTAGGCTTTTGCATTGAGGAAGACAAAAGGCTATTGGTATATCAGTTTATGTGTCGACAAAGCTTAGAGAAGCATCTATTCAAGAGTATTTCCTAA 504 0.3829 MFIPFKSSGREVIKDNVRQQPVTPRSSSTIRLRSRGRSYTPNQELIAASSLLRRFSFNDLKLATSNFKYDNLLGEGGFGSVFKGWVDQDENYATKPGIGIPIAVKTLNLNGLQGHKEWLAEISYLGELHHPNLVRLVGFCIEEDKRLLVYQFMCRQSLEKHLFKSIS* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0185 167 SUPERFAMILY Protein kinase-like (PK-like) 45 164 IPR011009 -
Gso19g0185 167 ProSiteProfiles Protein kinase domain profile. 67 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0185 167 Pfam Protein tyrosine and serine/threonine kinase 69 164 IPR001245 GO:0004672|GO:0006468
Gso19g0185 167 Gene3D Phosphorylase Kinase; domain 1 26 152 - -
Gso19g0185 167 PANTHER TYROSINE KINASE FAMILY PROTEIN 20 165 - -
Gso19g0185 167 PANTHER OS01G0588500 PROTEIN-RELATED 20 165 - -
Gso19g0185 167 ProSitePatterns Protein kinases ATP-binding region signature. 73 105 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0185 Gso-Chr19 2265932 2267170 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0185 5 163 Glycoside Hydrolase AT3G07070 38.272 7.32e-31 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso19g0185 PK_Tyr_Ser-Thr 8.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0185 - - gmx:100820361 333.954