Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0153 ATGGATCGCAGCAACACCTTTTCCTCCTCGCTCCTTCTGTTGAGCTTGTTGGGGTTCCACCTCTTCTTTGTTTCGTCGCAGGTCGAAGACGACGTGACATGTCTCAAGGGCATCAAAGAAACCCTCTCCGACCCTCTGAACCGCCTCAGCAACTGGCGCTTCGACAACACAACCGTAGGTTTCATCTGCGATTTTGTCGGCGTGTCTTGCTGGAACCAAAGGGAGAACCGCGTCATAGGTTTGGACCTCCAAGACTTCAAGCTCTCGGGTAAGATCCCCGAGGCTCTAAAATACTGTGGAAAGAGCATTCAAAGGTTGGATCTTGCTTCAAATTCTTTCTCTTCGGAGATCCCACATGAGATCTGTACTTGGATGCCGTTTTTGGTTTCTATAGATTTGTCAAGTAACCAGCTTTCTGGGGTTATTCCACCCACAATTGATAACTGTTCATATCTTAATGAGTTGGTGTTGTCGAATAATCAGCTTTCTGGTTCGATTCCATTTGAGTTTGGGAATTTGGGTAGGCTCAAGAAGTTTTCTGTGGCCAATAATAGGCTTACTGGAACAATTCCTGCGTTTTTCAATGGATTTGATAGGGAGGGTTTTGAAGGGAATAGTGGGTTATGTGGGGGTCCTCTTGGAGGAAAGTGTGGTGGGATTAGTAAGAAGAATCTTGCTATTATTATTGCTGCTGGGGTGTTTGGTGCTGCTGCTTCATTGTTGCTGGCTTTTGGGTTGTGGTGGTGGTACCATTTGAGTGGGAAGAATAAGAAGAAGGGTTATGGGGTTGGTTCTGGTGGTGTTGGTGGTGGTGGTGGTGGTGATTGGGCTATGAGGTTAAGAGGGTATAAGCTTGTGCAGGTTAGTCTCTTTCAGAAGCCTATTGTGAAGTTGAAGTTGGGGGATTTGATGGCTGCTACTAGTAATTTCAGCGAGGAGAATGTTCTTTTCACAACCAGGACGGGAGCAACGTATAAGGCTGATCTTCCGGATGGGTCTGCACTCGCGGTGAAGCGGTTGAGTGTGTGCAGGATCGGGGAGAAGCAGTTTGGGATGGAGATGAATCGGTTGGGGCAGGTTAGGCATCCGAATTTGGCGCCACTGTTGGGGTACTGTGTTGTGGAGGAGGAGAAGCTGTTGGTCTACAAGCACATGTCGAATGGGACGCTGTATTCGTTGTTGCATAGGAACGGTGGTGATGCGTTGGATTGGTTGATGAGGTTTAGGATTGGGTTGGGTGCGGCGAGGGGGCTTGCGTGGCTGCACCATGGCTGCCACCCTCCGATCATACAGCAGAACATTTGCTCCAGTGTGATTCTTGTTGACGAGGAGTTCGATGCCCGGTTGATGGACTTTGGGCTCGCAAGGCTCATGGCTTCAGACTCGAATGGTAGTTTTGTGAATGGTGATTTGGGGGAGCTCGGGTACATTGCGCCAGAGTATCCTAGTACACTTGTTGCTTCGTTGAAAGGGGATGTGTATGGGTTTGGTATTTTGCTTTTGGAGTTGGTGACTGGGCGAAAACCTCTTGATGTAAGCAATGGGGAGGCGGAGTTCAAGGGTAGCTTGGTGGATTGGGTGAATATGCATTCTAGTTCTGGCCGAATCAAGGATTGCATTGATAAAGCCATATCCGGAAGGGGACACGATGAGGAGATTCTGCAGTTTCTGAAAACTGCAATGAATTGTGTGGTTTCTCGCCCCAAGGATAGATGGTCTATGTACCAGGTTTATCATTCCATAAAGAGCATATCCAAAGAACAGAGTTTCTTTGAACATGATGATGAATTTCCCTTGATCTTTGGTAAGCCAGAAAACGAGGTTGTGACATAG 1833 0.4779 MDRSNTFSSSLLLLSLLGFHLFFVSSQVEDDVTCLKGIKETLSDPLNRLSNWRFDNTTVGFICDFVGVSCWNQRENRVIGLDLQDFKLSGKIPEALKYCGKSIQRLDLASNSFSSEIPHEICTWMPFLVSIDLSSNQLSGVIPPTIDNCSYLNELVLSNNQLSGSIPFEFGNLGRLKKFSVANNRLTGTIPAFFNGFDREGFEGNSGLCGGPLGGKCGGISKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLSGKNKKKGYGVGSGGVGGGGGGDWAMRLRGYKLVQVSLFQKPIVKLKLGDLMAATSNFSEENVLFTTRTGATYKADLPDGSALAVKRLSVCRIGEKQFGMEMNRLGQVRHPNLAPLLGYCVVEEEKLLVYKHMSNGTLYSLLHRNGGDALDWLMRFRIGLGAARGLAWLHHGCHPPIIQQNICSSVILVDEEFDARLMDFGLARLMASDSNGSFVNGDLGELGYIAPEYPSTLVASLKGDVYGFGILLLELVTGRKPLDVSNGEAEFKGSLVDWVNMHSSSGRIKDCIDKAISGRGHDEEILQFLKTAMNCVVSRPKDRWSMYQVYHSIKSISKEQSFFEHDDEFPLIFGKPENEVVT* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0153 610 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Gso19g0153 610 Gene3D Transferase(Phosphotransferase) domain 1 385 603 - -
Gso19g0153 610 SUPERFAMILY L domain-like 27 198 - -
Gso19g0153 610 SUPERFAMILY Protein kinase-like (PK-like) 287 579 IPR011009 -
Gso19g0153 610 Gene3D Phosphorylase Kinase; domain 1 272 384 - -
Gso19g0153 610 Pfam Leucine rich repeat 128 186 IPR001611 GO:0005515
Gso19g0153 610 ProSiteProfiles Protein kinase domain profile. 310 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g0153 610 Pfam Protein tyrosine and serine/threonine kinase 333 526 IPR001245 GO:0004672|GO:0006468
Gso19g0153 610 Gene3D Ribonuclease Inhibitor 28 219 IPR032675 -
Gso19g0153 610 PANTHER - 11 602 - -
Gso19g0153 610 PANTHER OS07G0107800 PROTEIN-RELATED 11 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0153 Gso-Chr19 1847046 1849529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0153 11 609 Receptor kinase-like Gene Family AT3G28450 62.664 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gso19g0153 PK_Tyr_Ser-Thr 2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0153 - - gmx:100810378 1132.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0462 13 16675033 16677584 Gso19g0153 19 1847046 1849529 GST