Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0129 ATGGATTTTGTTCTAAATTACCTTAATGCCAATACAATTGGAGTTCTTTCGCTAATCCTCTTCTGTTTGTTTTTGTATCATCCCTTCAAATTTGCTCGAGGTAAAAAAGAGGCTCCCACAGTTGCAGGTGCATGGCCAATACTTGGTCACCTTCCACTGTTAAATGGTTCAGATATACCCCATAGAGCCTTGGGTGATTTGGCTGACAAGTATGGACCCATATTCACCATCAAACTTGGCGTCAAAAAGGCTTTAGTAATTAGCAATTGGGAAATAGCTAAGGAATGCTTCACCACAAATGACATTTTTGTTTCGTCTCGCCCTAAGCTTGTTGCCGTTGAGTACATGGGCTACAACCAAGCCATGTTAGGCTTTGCACCCTATGGTCCTTATTGGCGCGAACTACGAAAGGTTGCAACGTTAGAGATCCTCTCTAATCGCCGAGTGGAGCAACTACAAGATGTTCGTGTCTCTGAAGTTCAACATTCGATTAAAGATCTCTTCAATGTTTGGTGTAGCAAAAAGAACGAGTCTGGTTATGCATTGGTAGAGCTGAAACAATGGTTTTATCATTTGACATTCAACATGGTTCTTCAAATGGTCGTTGGGAAGCGATATTTCAGTGCTACAACTGTGGATGATCAAGAGATGGCTCAAAGATGTGTGAAAGCTGTGAAGGAGTTCATGCGTCTCATAGGGGTGTTTACAGTGGGAGATGCTATTCCTTTTTTGAGAAGGTTTGATTTTGGTGGCCATGAGAAGGCCATGAAAGAAACTGGGAAAGAACTGGATAATATTTTGGGTGAGTGGTTAGAGGAGCACCGACAAAACAGGTCTTTGGGTGAAAGTATTGATCGAGACTTCATGGATGTGATGATTTCCTTGCTTGATGGAAAAACAATTCAAGGGATTGATGCCGATACCATCATCAAATCCACTGTACTGGCAGTAATTTTAGGAGCAACTGACACAACCAGTACTACTCTTACGTGGGCAATATGCTTGATGTTGAGAAATCCTTTTGCGTTGGAAAATGTTAAAGCGGAACTTGACATCCAAGTTGGAAAAGAAAGATGTATAACTGAATCTGATATAAGTAAGTTAACATACCTTCAAGCTGTTGTCAAAGAAACTTTAAGATTATACCCTGCAGGTCCTCTCTCAGTACCTCGAGAATTCACGGAGAATTGCACTTTAGGTGGCTACAACATTGAAAAAGGAACACGTCTAATTACAAATCTTTGGAAGATTCACACAGATATTAATGTTTGGTCAGATCCATTAGAGTTCAAACCAGAAAGATTTCTCACCACCTACAAAGATGTTGATGTTAGGGGTCATCATTTTGAGCTATTACCATTTGGAGGTGGTAGAAGAATTTGTCCTGGAATATCCTTTGGCCTTCAAATGGTTCATTTAATTCTTGCTAGGTTTTTGCATTCCTTTCAAATCCTAAATATGTCAACTGAACCTCTTGATATAACTGAAACCTTTGGATCAACCAACACTATATCTACCCCACTTGACATTCTTATTAAACCATATTTATCTCCTAATTGTTATGTATGA 1569 0.3964 MDFVLNYLNANTIGVLSLILFCLFLYHPFKFARGKKEAPTVAGAWPILGHLPLLNGSDIPHRALGDLADKYGPIFTIKLGVKKALVISNWEIAKECFTTNDIFVSSRPKLVAVEYMGYNQAMLGFAPYGPYWRELRKVATLEILSNRRVEQLQDVRVSEVQHSIKDLFNVWCSKKNESGYALVELKQWFYHLTFNMVLQMVVGKRYFSATTVDDQEMAQRCVKAVKEFMRLIGVFTVGDAIPFLRRFDFGGHEKAMKETGKELDNILGEWLEEHRQNRSLGESIDRDFMDVMISLLDGKTIQGIDADTIIKSTVLAVILGATDTTSTTLTWAICLMLRNPFALENVKAELDIQVGKERCITESDISKLTYLQAVVKETLRLYPAGPLSVPREFTENCTLGGYNIEKGTRLITNLWKIHTDINVWSDPLEFKPERFLTTYKDVDVRGHHFELLPFGGGRRICPGISFGLQMVHLILARFLHSFQILNMSTEPLDITETFGSTNTISTPLDILIKPYLSPNCYV* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0129 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Gso19g0129 522 SUPERFAMILY Cytochrome P450 44 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PANTHER CYTOCHROME P450 82A2 1 521 - -
Gso19g0129 522 Gene3D Cytochrome P450 30 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PANTHER CYTOCHROME P450 82C3-RELATED 1 521 - -
Gso19g0129 522 Pfam Cytochrome P450 42 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g0129 522 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0129 Gso-Chr19 1422296 1424572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0129 38 522 Cytochrome P450 AT4G31940 50.607 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0129 - - gmx:100803451 1041.57