Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0120 ATGGCTTCAGGCGGAACAGAAGCTTTTCCAGATTTGGGTAAACACTGCCAGCACCGCGATTGCAACCAGCTCGATTTTCTTCCTTTCACCTGCGACGGTTGCCAACAGGTGTTTTGTTTGGAACACAGATCCTACAAGTCCCATTCATGCCCAAAATCCGACCACAACAGCAGAAAGGTGGTTGTTTGCGAAGCATGTTCCATGTCCATCGAGACCACCGGCAACGTGGGACAAGACAAAGAGGCAATCTTGCAGAAGCATCTCAAGTCTGGTATCTGTGACCCCACCAAGAAGAAGAAACCAACTTGCCCCGTCAAGCGTTGCAAGGAGGTTTTGACGTTTTCCAACACCAGCACATGTAAAACTTGCCACATTAAGGTGTGCCTCAAGCACCGTTTCCCTGCTGATCATGCTTGTAGCAGAGGAGCTTCAGCTTCTGTTGCTAATGGTTTGTGGAACAATAGGTTCTTGGCTGCTTTTGGGTAA 486 0.4877 MASGGTEAFPDLGKHCQHRDCNQLDFLPFTCDGCQQVFCLEHRSYKSHSCPKSDHNSRKVVVCEACSMSIETTGNVGQDKEAILQKHLKSGICDPTKKKKPTCPVKRCKEVLTFSNTSTCKTCHIKVCLKHRFPADHACSRGASASVANGLWNNRFLAAFG* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0120 161 Gene3D - 80 151 IPR035896 -
Gso19g0120 161 ProSiteProfiles Zinc finger AN1-type profile. 97 147 IPR000058 GO:0008270
Gso19g0120 161 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 6 140 - -
Gso19g0120 161 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Gso19g0120 161 SMART AN1_Zf_4 103 144 IPR000058 GO:0008270
Gso19g0120 161 Pfam AN1-like Zinc finger 103 141 IPR000058 GO:0008270
Gso19g0120 161 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Gso19g0120 161 Gene3D - 2 67 IPR035896 -
Gso19g0120 161 SUPERFAMILY AN1-like Zinc finger 95 144 IPR035896 -
Gso19g0120 161 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
Gso19g0120 161 SUPERFAMILY AN1-like Zinc finger 9 61 IPR035896 -
Gso19g0120 161 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 6 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0120 Gso-Chr19 1310417 1312980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0120 1 160 C2H2 Transcription Factor Family AT3G28210 64.596 2.30e-75 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0120 - - gmx:100790041 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0120 19 1310417 1312980 Gso19g0120 19 1310417 1312980 ECH