Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0118 ATGGCTTCATTTTCTCTCTTCTTCTTCTTCTTCCTCTTCACCACATTGCTACTATCTTTTTCTTCTGCTAACGCGCGACTCACCTTGGATTTCTACAATGACACGTGTCCACAGTTCAGCCAGATCATTAGGGACACAGTAACCAGCAAGCAGATCGCCAGCCCCACCACCGCCGCCGCCACCCTCCGCCTCTTCCTCCACGACTGCCTCCTCCCCAACGGCTGCGACGCCTCCATCCTCCTCTCCTCCACCGCCTTCTCCAAGGCCGAGCGCGACGCCGACATCAACCTCTCCCTCCCCGGCGACGCCTTCGACCTCGTCGTCCGTGCCAAGACCGCCCTCGAGCTCTCCTGCCCCAACACCGTCTCCTGCTCCGACATCCTCTCCGCCGCCACCCGCGACCTCCTCACCATGCTCGGCGGCCCCTTCTTCCCCGTCTTCCTCGGCCGCCGCGACGGCCGAACCTCCCTCGCCTCCGCCGTATCCTCCCACCTCCCCACCCCCTCCATGCCCATCTCTCAAATCACCCAACTCTTCGCCAAACGCGGCTTCACCGTCGAAGAATTCGTCGCCCTCAGTGGGGCCCACACCGTCGGATTCTCTCACTGCTCCGAGTTCGTCACGAACCTCTCCAACAACACTTCCTCCTCCTACAACCCTCGCTACGCTCAGGGGCTTCAAAAGGCTTGTGCAGATTACAAAACTAACCCTACCTTATCAGTCTTCAACGACATCATGACGCCGAACAAGTTCGACAATGCTTACTTCCAGAACCTTCCCAAGGGTTTGGGTGTGTTGAAATCTGACCATGGTTTGTATGGTGACCCTTCTACGAGACCCTTTGTGGAGACCTTTGCTAAGGATCAAAATAGATTCTTTCAGGTTTTTGCTAGGGCGATGCACAAGTTGAGTCTCTTGAATGTGCAGACTGGGAGGAAAGGAGAGATCAGGCGCAGGTGTGATCAGATTAATTGA 975 0.5662 MASFSLFFFFFLFTTLLLSFSSANARLTLDFYNDTCPQFSQIIRDTVTSKQIASPTTAAATLRLFLHDCLLPNGCDASILLSSTAFSKAERDADINLSLPGDAFDLVVRAKTALELSCPNTVSCSDILSAATRDLLTMLGGPFFPVFLGRRDGRTSLASAVSSHLPTPSMPISQITQLFAKRGFTVEEFVALSGAHTVGFSHCSEFVTNLSNNTSSSYNPRYAQGLQKACADYKTNPTLSVFNDIMTPNKFDNAYFQNLPKGLGVLKSDHGLYGDPSTRPFVETFAKDQNRFFQVFARAMHKLSLLNVQTGRKGEIRRRCDQIN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0118 324 CDD secretory_peroxidase 27 323 IPR033905 GO:0004601|GO:0042744
Gso19g0118 324 PANTHER - 7 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 Pfam Peroxidase 49 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 Gene3D - 30 324 - -
Gso19g0118 324 Gene3D Peroxidase, domain 2 166 303 - -
Gso19g0118 324 PANTHER PEROXIDASE 31 7 324 - -
Gso19g0118 324 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso19g0118 324 SUPERFAMILY Heme-dependent peroxidases 27 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0118 Gso-Chr19 1287388 1288705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0118 22 324 Peroxidase AT3G28200 67.327 2.73e-156 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0118 K00430 - gmx:100798144 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0118 19 1287388 1288705 Gso19g0118 19 1287388 1288705 ECH
Gso13g0484 13 16920983 16922278 Gso19g0118 19 1287388 1288705 GST