Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0110 ATGTCGCAGCAATTAGGGTTCGCGATCGAGCTATACCTAGACCCTGCGTTGGAGAATCAGGTTCTGAAAGCATGGAACGTTCTTGCGAGAAGACAAATCAGCACGCACCTGATAGAAATGGAGTCTCGGCCACACATAACCCTATTCTCGGCGCCATTTCTAGAACCTTCGAAGCTCGAATCTCTCCTGAAAGGCTTCGCATCGAAGCACGATCCTCTCCCTCTCACCTTCTCTTCCCTCGCCACTTTCCCCAACGACCCCGACAACCTCCTCTTCCTCGCCCCAACCCCTTCCCTCTCACTCCTCCACCTTCAGTCACAGCTCTGTGACGCTATCAGAAAAGAAGGCCTCGAAATCGGTGACGATTACGCTTTCAATTCCTGGATCCCTTATTGCTCCGTTGCACACCATGTCCCCAAAAACAGAATGCCTGAGGCTTTCTCCCTCTTGAGGGAACTCAAGCTTCCGGTTTCCGGTTACGCCATGGATATCGCTCTCGTTCAGTTCTCTCCGGTTCGGGAAATCTTCTCGTTTGTGCTCGGCAACAACAGTTGA 555 0.5207 MSQQLGFAIELYLDPALENQVLKAWNVLARRQISTHLIEMESRPHITLFSAPFLEPSKLESLLKGFASKHDPLPLTFSSLATFPNDPDNLLFLAPTPSLSLLHLQSQLCDAIRKEGLEIGDDYAFNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYAMDIALVQFSPVREIFSFVLGNNS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0110 184 Pfam 2'-5' RNA ligase superfamily 43 167 - -
Gso19g0110 184 Gene3D Cyclic phosphodiesterase 7 182 - -
Gso19g0110 184 PANTHER - 2 183 - -
Gso19g0110 184 SUPERFAMILY LigT-like 7 139 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0110 Gso-Chr19 1179456 1181883 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0110 6 183 Calmodulin-binding Proteins AT5G40190 64.607 8.27e-80 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0110 - - gmx:100802388 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0110 19 1179456 1181883 Gso19g0110 19 1179456 1181883 ECH