Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0109 ATGTCGCAGCAATTAGGGTTCGCGATCGAGCTATACCTAGACCCTGCGTTGGAGAATCAGGTTCTGAAAGCATGGAACGTTCTTGCGAGAAGACAAATCAGCACGCACCTGATAGAAATGGAGTCTCGGCCACACATAACCCTATTCTCGGCGCCATTTCTAGAACCTTCGAAGCTCGAATCTCTCCTGAAAGGCTTCGCATCGAAGCACGATCCTCTCCCTCTCACCTTCTCTTCCCTCGCCACTTTCCCCAACGACCCCGACAACCTCCTCTTCCTCGCCCCAACCCCTTCCCTCTCACTCCTCCACCTTCAGTCACAGCTCTGTGACGCTATCAGAAAAGAAGGCCTCGAAATCGGTGACGATTACGCTTTCAATTCCTGGATCCCTTATTGCTCCGTTGCACACCATGTCCCCAAAAACAGAATGCCTGAGGCTTTCTCCCTCTTGAGGGAACTCAAGCTTCCGGTTTCCGGTTACGCCATGGATATCGCTCTCGTTCAGTTCTCTCCGGTTCGGGAAATCTTCTCGTTTGTGCTCGGCAACAACGTAGACTCTTGA 561 0.5205 MSQQLGFAIELYLDPALENQVLKAWNVLARRQISTHLIEMESRPHITLFSAPFLEPSKLESLLKGFASKHDPLPLTFSSLATFPNDPDNLLFLAPTPSLSLLHLQSQLCDAIRKEGLEIGDDYAFNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYAMDIALVQFSPVREIFSFVLGNNVDS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0109 186 Pfam 2'-5' RNA ligase superfamily 43 167 - -
Gso19g0109 186 Gene3D Cyclic phosphodiesterase 7 182 - -
Gso19g0109 186 SUPERFAMILY LigT-like 7 139 IPR009097 -
Gso19g0109 186 PANTHER - 2 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0109 Gso-Chr19 1175775 1176757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0109 6 186 Calmodulin-binding Proteins AT5G40190 64.088 1.25e-80 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0109 - - gmx:100305618 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0496 13 17074087 17075213 Gso19g0109 19 1175775 1176757 GST