Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0106 ATGATGGATAGAAGGCACTGTTACAAGGATTTGCTGCCATTGGTGGTGCTTGTTGCCAATGAATGCAACAACACAGGCTTGTTCACTCTCTTCAAAGCAGCCACACTGCAAGGGATGAGTAACTATGTCTTTGTCACCTATGCCTATTCTGTTGCCTTTCTTGTACTACTTCCTGTCACTTTTTTCTACAGAAGATCAAGAGTGGTTCCTCCACTCACTTTTTCCATCCTATCCAAAATTGCCCTTCTTGGAGTGATAGGGTGTTCATCTCAGATCTTGGGGTATGCTGGCATCAGGTATAGTTCTCCCACACTTTCCTCTGCAATCAGCAACCTCACTCCTGCTTTCACCTTCGTGCTTGCAGTCATTTGCAGGATGGAAAAGATAGCTGTAAAACGTAGAACAACCCAAGCTAAGATATTGGGCAGCATAATATCAGTATTAGGTGCATTTGTTGTGACTTTCTACAAAGGCCAATCGGTCATCATAGCTGATAATTCCCCTTCCATTCAACTTCCACAATCAAATGGCATTCTTACTTCAGTGGATAGAAATTGGGTCATTGGTGGCCTTCTGCTCACAGCTTGCAATATACTACTTACTGTATGGTTCGTTTACCAGGTTGAAATCTTGAAGGAGTTCCCGGATGAACTATCTATGGTCTTCTTTTACAACTTGTGTGCAGCCATTGTAGCATCAATTGTAGGCTTATTAGGGGAGAAAAATTCAAGTGCATGGAAAATAAGACCAGATATATCACTGATCTCTATTGTTTGCACTGGAATATTTAACAAGTTCCTGAGTAGTGCAATATATGCTTGGGGAATACACTTAAAAGGGCCTGTGTATGTAGCAATGTTCAAGCCTCTCTCAATTGTTATTGCGGTTGCCATGGGTGTTATGTTCCTTGGTGATTCTCTATATGTTGGAAGAACTGGAAGTGTGGACTTGGAAGTAGGAGGGAGGCCCAAGATATGGAGGGTGTGTGCTAGGAGAAACAAGGGTGAGAAAAGAAGGGATGAACTGGCATAA 1032 0.4244 MMDRRHCYKDLLPLVVLVANECNNTGLFTLFKAATLQGMSNYVFVTYAYSVAFLVLLPVTFFYRRSRVVPPLTFSILSKIALLGVIGCSSQILGYAGIRYSSPTLSSAISNLTPAFTFVLAVICRMEKIAVKRRTTQAKILGSIISVLGAFVVTFYKGQSVIIADNSPSIQLPQSNGILTSVDRNWVIGGLLLTACNILLTVWFVYQVEILKEFPDELSMVFFYNLCAAIVASIVGLLGEKNSSAWKIRPDISLISIVCTGIFNKFLSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGVMFLGDSLYVGRTGSVDLEVGGRPKIWRVCARRNKGEKRRDELA* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0106 343 PANTHER WAT1-RELATED PROTEIN 6 335 - -
Gso19g0106 343 Pfam EamA-like transporter family 27 154 IPR000620 GO:0016020|GO:0016021
Gso19g0106 343 Pfam EamA-like transporter family 189 308 IPR000620 GO:0016020|GO:0016021
Gso19g0106 343 PANTHER WAT1-RELATED PROTEIN 6 335 IPR030184 GO:0016021|GO:0022857
Gso19g0106 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0106 Gso-Chr19 1139400 1142966 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0106 2 326 Nodulin-like Gene Family AT3G28050 49.235 2.67e-105 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0106 - - gmx:100791805 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0106 19 1139400 1142966 Gso19g0106 19 1139400 1142966 ECH