Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0105 ATGCAAAGAGGATGGTCCTTCTACAAGGATTTTCTGCCAGTTGTGGTGATTATAGGCAATGAATTCAATGACATGGGTACACTCACACTCTTCAAAGCAGCCACACTGCAAGGGATGAACAACCATGTCTTTCTGGCCTATGCTTATGCTCTTGCTACCATTATACTCATTCCTATCACTTTTTTCAGCAGAAGATCAAGAGTGGTTCCTGTTCCTCCACTTAGTTTCTCCATAGTATCCAAAATAGTTCTTCTTGGGGTGATAGGAAGTTCATCTCAGGTACTGGGTTATGCAGGCATTAGCTACAGTTCTCCAGCACTTGCTTCATCAATTGGCAATCTGGTACCTGCTTTCACCTTCATCCTTGCCGTAATTTGCAGGATGGAAAAGTTAGCTGCCAAAAGTAGAAGTAGTCAAGCTAAGGTGATTGGAAGCATAATATCAATAGCAGGTGCATTTGTATTGACTTTCTACAAAGGACCATCAATCATCAATGCTCTCACACATCTTCCCTTACTACTTCAACAGCCAATTAACTTTCTTAAATCAGAGGATGAAAGTTGGGCTATTGCTGGCATTCTGCTGATAGCTGACTACTTTCTGGCTTCAGTATGGTACATTGTACAGGTGGATATCTTGAAAGTGTTCCCGGATGAACTAACTACAGTTTTCTTTTACAATGTGACTGCCACCATATTATCTACTACTGTTGGTTTCTTTGCAGTTCCAAATGCTAGTGCTTGGAAAATAGGACTAGATATTTCACTGATATCCATTGTTTGCTCTGGAATATTTGGGAAGTTAATGAGCAATGTAGTTTATGCCTGGGCACTGTATTTAAAGGGGCCTGTCTATGTAACATCCTTCAAGCCACTCCAAATTGTTATTGCTGTTGCAATGGGTGTTATGTTCCTTGATGATAGTCTTTACATTGGAAGTGTAGTTGGAGCCACAATAGTATCAATTGGTCTTTATGCTGTATTGTGGGGCAAGGCAAAAGAAGAGATAGAGGAAGATGTTGGTAGCCAAGAATCACCAACTATTGAGAATGTTCCTCTATTGCAAAGCCACAGAACTGAAACATCAGAAAAGAATGTTTAA 1101 0.4024 MQRGWSFYKDFLPVVVIIGNEFNDMGTLTLFKAATLQGMNNHVFLAYAYALATIILIPITFFSRRSRVVPVPPLSFSIVSKIVLLGVIGSSSQVLGYAGISYSSPALASSIGNLVPAFTFILAVICRMEKLAAKSRSSQAKVIGSIISIAGAFVLTFYKGPSIINALTHLPLLLQQPINFLKSEDESWAIAGILLIADYFLASVWYIVQVDILKVFPDELTTVFFYNVTATILSTTVGFFAVPNASAWKIGLDISLISIVCSGIFGKLMSNVVYAWALYLKGPVYVTSFKPLQIVIAVAMGVMFLDDSLYIGSVVGATIVSIGLYAVLWGKAKEEIEEDVGSQESPTIENVPLLQSHRTETSEKNV* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0105 366 MobiDBLite consensus disorder prediction 343 360 - -
Gso19g0105 366 Pfam EamA-like transporter family 26 156 IPR000620 GO:0016020|GO:0016021
Gso19g0105 366 MobiDBLite consensus disorder prediction 339 366 - -
Gso19g0105 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 332 - -
Gso19g0105 366 PANTHER WAT1-RELATED PROTEIN 5 356 - -
Gso19g0105 366 PANTHER WAT1-RELATED PROTEIN 5 356 IPR030184 GO:0016021|GO:0022857
Gso19g0105 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0105 Gso-Chr19 1129814 1133491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0105 1 360 Nodulin-like Gene Family AT3G28050 46.381 1.60e-107 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0105 - - gmx:100790743 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0105 19 1129814 1133491 Gso19g0105 19 1129814 1133491 ECH
Gso13g0498 13 17112623 17117141 Gso19g0105 19 1129814 1133491 GST