Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0103 ATGGCAAGAAGATGGTCTTTTTACATGGATATGCTGCCAGTTTTGGTGATTATAGGCAACCAATTAAGTTTGGTAGCATTAGTCACACTGTTCAAAGAAGCCACGCTGCAAGGGATGAACAACCATGTCTTTGTTGCTTATACTTCTGCTGTTGCTGCCACTCTACTCTTTCCTATCACTTTTTTCAGAAGAAGATCAAGAGTGGTTCCTCCACTTAGTTTCTCCATAGCATCCAAAATCATGTTCATTGGGATGATAGGAACCTCATCTCAGATAATGTATTATGTTGGAGTTAGCTACAGTTCTCCAACACTTGCTTCATCAATCGCCAATCTGGGCCCTGCTTTCACCTTCATTCTTGCCATCATTTTCAGGATGGAAAAGATAGCTGCCAAAAGCAGAAGTAGTCAAGCTAAGGTAGTTGGAAGCATAATATCAATAACAGGAGCATTTGTATTGACTTTGTACAAAGGCCATTCAATCATCAAAGCTCATTCCCATGATCTTTCCATACCACTTCAACATCCATTTAGCTTTCTTAAATCTGGGGATGCAGATTGGGTCATTGCTGGCATTCTGCTCACAGCTGAATGTTTAATAGGTTCATTATGTTACATTGTGCAGGCTGATGTTCTAAAAGTGTTCCCGGATGAAGTGACAATAGTCCTCTTTTACAACGTGACTTCCACAGTCATGTCTACACTTGTAGCTTTATTTGCAGTGCCAAACGCAAATGCTTGGAAAGTAGGACTGAATATTTCATTAATCTCCATTATTTGCACTGGAACAATTCAGAAAGTCATGGGCTATATACTTTCCACGTGGGCACTGCGCTTAAAGGGGCCTGTGTATCTAGCATCATTCTCACCCCTCCAAATTGTTTTTTCTATTGCCATGGGTGTCATCTTCCTTGGTGACTCTCTTCATGTTGGAAGTATAGTTGGAGCGGCAATAGTATCATTTGGCTTTTATGCTGTGTTGTGGGGCAAAGCAACAGAGGAGATAGAGGAAGAAGTTGATTACCCGGAATCACCAGCTACTGAGAATGTTCCTTTATTGCAAAGCTATGGAACCGAAAACTTATGA 1086 0.4098 MARRWSFYMDMLPVLVIIGNQLSLVALVTLFKEATLQGMNNHVFVAYTSAVAATLLFPITFFRRRSRVVPPLSFSIASKIMFIGMIGTSSQIMYYVGVSYSSPTLASSIANLGPAFTFILAIIFRMEKIAAKSRSSQAKVVGSIISITGAFVLTLYKGHSIIKAHSHDLSIPLQHPFSFLKSGDADWVIAGILLTAECLIGSLCYIVQADVLKVFPDEVTIVLFYNVTSTVMSTLVALFAVPNANAWKVGLNISLISIICTGTIQKVMGYILSTWALRLKGPVYLASFSPLQIVFSIAMGVIFLGDSLHVGSIVGAAIVSFGFYAVLWGKATEEIEEEVDYPESPATENVPLLQSYGTENL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0103 361 PANTHER WAT1-RELATED PROTEIN 5 353 - -
Gso19g0103 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
Gso19g0103 361 PANTHER WAT1-RELATED PROTEIN 5 353 IPR030184 GO:0016021|GO:0022857
Gso19g0103 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 330 - -
Gso19g0103 361 Pfam EamA-like transporter family 18 154 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0103 Gso-Chr19 1121265 1124622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g0103 1 360 Nodulin-like Gene Family AT3G28050 42.895 4.60e-100 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0103 - - gmx:100794437 621.313